RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 COG1Q8WTW3 980 aa17.11■□□□□ 0.33
NR1H3-235ENST00000616973 CEP170P1Q96L14 293 aa17.11■□□□□ 0.33
NR1H3-235ENST00000616973 PCIF1Q9H4Z3 704 aa17.11■□□□□ 0.33
NR1H3-235ENST00000616973 FBXO40Q9UH90 709 aa17.11■□□□□ 0.33
NR1H3-235ENST00000616973 TBX20Q9UMR3 447 aa17.11■□□□□ 0.33
NR1H3-235ENST00000616973 PFASO15067 1338 aa17.11■□□□□ 0.33
NR1H3-235ENST00000616973 EMSYQ7Z589 1322 aa17.11■□□□□ 0.33
NR1H3-235ENST00000616973 LRRC37A2A6NM11 1700 aa17.11■□□□□ 0.33
NR1H3-235ENST00000616973 A0A0A6YYK5 440 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-235ENST00000616973 TISP43B9A030 160 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 EVI5O60447 810 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 PALMO75781 387 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 ACTR2P61160 394 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 STXBP2Q15833 593 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 MEI1Q5TIA1 1274 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 SWSAP1Q6NVH7 229 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 MIS18BP1Q6P0N0 1132 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 NFRKBQ6P4R8 1299 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 RIOX2Q8IUF8 465 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 RDH13Q8NBN7 331 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 SLC30A5Q8TAD4 765 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 SYT11Q9BT88 431 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 UBXN6Q9BZV1 441 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 GPR88Q9GZN0 384 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 IGSF9BQ9UPX0 1349 aa17.1■□□□□ 0.33
NR1H3-235ENST00000616973 EIF3JO75822 258 aaKnown RBP17.09■□□□□ 0.33
NR1H3-235ENST00000616973 ABCD1P33897 745 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 GABPB1Q06547 395 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-235ENST00000616973 PRKG1Q13976 671 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 EPC2Q52LR7 807 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 OLIG1Q8TAK6 271 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 RUBCNQ92622 972 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
NR1H3-235ENST00000616973 ABCB6Q9NP58 842 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 L1RE1Q9UN81 338 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 CSADQ9Y600 493 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 UTRNP46939 3433 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 GRID2IPA4D2P6 1211 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 CCDC169A6NNP5 214 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.33
NR1H3-235ENST00000616973 DDNO94850 711 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-235ENST00000616973 ATG7O95352 703 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 H2AFZP0C0S5 128 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 SUPT20HL2P0C7V6 817 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 DLG4P78352 724 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 ENPEPQ07075 957 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 PPP3CAQ08209 521 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 C1orf220Q5T0J3 134 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 TREML2Q5T2D2 321 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 H2AFVQ71UI9 128 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-235ENST00000616973 PROCA1Q8NCQ7 364 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-235ENST00000616973 KCNN1Q92952 543 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 PKNOX2Q96KN3 472 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 KCNG1Q9UIX4 513 aa17.09■□□□□ 0.33
NR1H3-235ENST00000616973 CES2O00748 559 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 NCK2O43639 380 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 PAFAH1B1P43034 410 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 PRKCEQ02156 737 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 KIF22Q14807 665 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 XKR3Q5GH77 459 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 PHLDB3Q6NSJ2 640 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 CCDC70Q6NSX1 233 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 HDXQ7Z353 690 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 SULF1Q8IWU6 871 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 SPATA4Q8NEY3 305 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 BSNDQ8WZ55 320 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 CYP26B1Q9NR63 512 aa17.08■□□□□ 0.33
NR1H3-235ENST00000616973 SRCAPQ6ZRS2 3230 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 DENND3A2RUS2 1198 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 ANKRD63C9JTQ0 380 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 H0YCG3 227 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 CNGA1P29973 690 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 FBXL18Q96ME1 805 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 ATP6V0A4Q9HBG4 840 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 XPNPEP1Q9NQW7 623 aa17.08■□□□□ 0.32
NR1H3-235ENST00000616973 ADRB2P07550 413 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 SCP2P22307 547 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 ADSSP30520 456 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 IREB2P48200 963 aaKnown RBP17.07■□□□□ 0.32
NR1H3-235ENST00000616973 ALDH5A1P51649 535 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-235ENST00000616973 PPATQ06203 517 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 C2orf54Q08AI8 447 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 TRMT1LQ7Z2T5 733 aaKnown RBP17.07■□□□□ 0.32
NR1H3-235ENST00000616973 LNX1Q8TBB1 728 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-235ENST00000616973 PLEKHO2Q8TD55 490 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 TMC2Q8TDI7 906 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 BTBD7Q9P203 1132 aa17.07■□□□□ 0.32
NR1H3-235ENST00000616973 SEPT9Q9UHD8 586 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-235ENST00000616973 MAFBQ9Y5Q3 323 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-235ENST00000616973 A0A0G2JLL6 359 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-235ENST00000616973 SP2Q02086 613 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 SNRNP35Q16560 246 aaKnown RBP17.06■□□□□ 0.32
NR1H3-235ENST00000616973 MAP9Q49MG5 647 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 PRRT2Q7Z6L0 340 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-235ENST00000616973 LRRC57Q8N9N7 239 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms