RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 XKR9Q5GH70 373 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 SLC7A3Q8WY07 619 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 IPO9Q96P70 1041 aaKnown RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 OSMRQ99650 979 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 FTHL17Q9BXU8 183 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 AGO3Q9H9G7 860 aaKnown RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 WRAP73Q9P2S5 460 aaPredicted RBP11.58□□□□□ -0.56
SDF2-208ENST00000589788 PADI3Q9ULW8 664 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 PPME1Q9Y570 386 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 PCDHB6Q9Y5E3 794 aa11.58□□□□□ -0.56
SDF2-208ENST00000589788 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.57□□□□□ -0.56
SDF2-208ENST00000589788 LAD1O00515 517 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 GPR182O15218 404 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 GPR32O75388 356 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 MAFO75444 373 aaPredicted RBP11.57□□□□□ -0.56
SDF2-208ENST00000589788 SLITRK3O94933 977 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 UPP2O95045 317 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 GJB5O95377 273 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 POLGP54098 1239 aaPredicted RBP11.57□□□□□ -0.56
SDF2-208ENST00000589788 CDC42EP1Q00587 391 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 PTCRAQ6ISU1 281 aaPredicted RBP11.57□□□□□ -0.56
SDF2-208ENST00000589788 LINC01465Q8N7H1 131 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 INTS4Q96HW7 963 aaKnown RBP11.57□□□□□ -0.56
SDF2-208ENST00000589788 GUCD1Q96NT3 240 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 CEP89Q96ST8 783 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 CDX2Q99626 313 aaPredicted RBP11.57□□□□□ -0.56
SDF2-208ENST00000589788 RAD9AQ99638 391 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 HSD17B14Q9BPX1 270 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 RAB34Q9BZG1 259 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 SLC6A16Q9GZN6 736 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 INSL6Q9Y581 213 aa11.57□□□□□ -0.56
SDF2-208ENST00000589788 ARID2Q68CP9 1835 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 MYO9BQ13459 2157 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 IGKV6-21A0A0C4DH24 114 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 ENPP3O14638 875 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 LYPLA2O95372 231 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 HSP90AA1P07900 732 aaKnown RBP11.56□□□□□ -0.56
SDF2-208ENST00000589788 GRIN2CQ14957 1233 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 FAM43BQ6ZT52 329 aaPredicted RBP11.56□□□□□ -0.56
SDF2-208ENST00000589788 BRAPQ7Z569 592 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 TMEM40Q8WWA1 233 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 TOP1MTQ969P6 601 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 ZNF668Q96K58 619 aaPredicted RBP11.56□□□□□ -0.56
SDF2-208ENST00000589788 YME1L1Q96TA2 773 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 ERVK-5Q9HDB9 667 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 TUFT1Q9NNX1 390 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 ANKEF1Q9NU02 776 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 SUCLA2Q9P2R7 463 aaPredicted RBP11.56□□□□□ -0.56
SDF2-208ENST00000589788 LRWD1Q9UFC0 647 aa11.56□□□□□ -0.56
SDF2-208ENST00000589788 NOC2LQ9Y3T9 749 aaKnown RBP11.56□□□□□ -0.56
SDF2-208ENST00000589788 DENND3A2RUS2 1198 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 ZBTB39O15060 712 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 GAS2O43903 313 aaKnown RBP11.55□□□□□ -0.56
SDF2-208ENST00000589788 FOSL2P15408 326 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 EIF4BP23588 611 aaKnown RBP11.55□□□□□ -0.56
SDF2-208ENST00000589788 GPC3P51654 580 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 TAP1Q03518 808 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 DRP2Q13474 957 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 EMC2Q15006 297 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 HAUS3Q68CZ6 603 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 DTHD1Q6ZMT9 781 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 RHPN2Q8IUC4 686 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 C4orf32Q8N8J7 132 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 TCP11Q8WWU5 503 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 PSPC1Q8WXF1 523 aaKnown RBP11.55□□□□□ -0.56
SDF2-208ENST00000589788 MYLIPQ8WY64 445 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 GAS2L1Q99501 681 aaPredicted RBP11.55□□□□□ -0.56
SDF2-208ENST00000589788 POLR3CQ9BUI4 534 aaPredicted RBP11.55□□□□□ -0.56
SDF2-208ENST00000589788 GCOM2Q9BZD3 368 aaPredicted RBP11.55□□□□□ -0.56
SDF2-208ENST00000589788 ADAMTS10Q9H324 1103 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 PRDM12Q9H4Q4 367 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 DHX33Q9H6R0 707 aaKnown RBP11.55□□□□□ -0.56
SDF2-208ENST00000589788 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
SDF2-208ENST00000589788 ST3GAL5Q9UNP4 418 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 STXBP5LQ9Y2K9 1186 aa11.55□□□□□ -0.56
SDF2-208ENST00000589788 LCHNA4D1U4 455 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 MED24O75448 989 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 XRCC6P12956 609 aaKnown RBP eCLIP11.54□□□□□ -0.56
SDF2-208ENST00000589788 DARSP14868 501 aaKnown RBP11.54□□□□□ -0.56
SDF2-208ENST00000589788 IBSPP21815 317 aaPredicted RBP11.54□□□□□ -0.56
SDF2-208ENST00000589788 RPA1P27694 616 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 CCT6AP40227 531 aaKnown RBP11.54□□□□□ -0.56
SDF2-208ENST00000589788 PRPHP41219 470 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 PDIA5Q14554 519 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 FERMT3Q86UX7 667 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 ZNF410Q86VK4 478 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 FAM228AQ86W67 206 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 CATSPER3Q86XQ3 398 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 PIGOQ8TEQ8 1089 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 TMEM143Q96AN5 459 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 NLRP4Q96MN2 994 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 NACC1Q96RE7 527 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 ADAM2Q99965 735 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 INO80BQ9C086 356 aaPredicted RBP11.54□□□□□ -0.56
SDF2-208ENST00000589788 TMX1Q9H3N1 280 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 CERS4Q9HA82 394 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 ATP6V0A4Q9HBG4 840 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 C1orf112Q9NSG2 853 aa11.54□□□□□ -0.56
SDF2-208ENST00000589788 LRFN2Q9ULH4 789 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms