RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 CCND3P30281 292 aaPredicted RBP11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 HOXD13P35453 343 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 MARSP56192 900 aaKnown RBP11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 IGBP1P78318 339 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 BEX3Q00994 111 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 SLFN12LQ6IEE8 588 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 NFRKBQ6P4R8 1299 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 LRRC55Q6ZSA7 311 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 CREBRFQ8IUR6 639 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 NME8Q8N427 588 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 ARRDC4Q8NCT1 418 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 KAT6AQ92794 2004 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 SEZ6LQ9BYH1 1024 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 SMIM35A0A1B0GVV1 85 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 C17orf102A2RUQ5 167 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 MBLAC1A4D2B0 266 aaPredicted RBP11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 N4BP3O15049 544 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 TGFB1I1O43294 461 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 ADAMTS4O75173 837 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 PHKA2P46019 1235 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 MTIF2P46199 727 aaKnown RBP11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 TRIM32Q13049 653 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 PCBP1Q15365 356 aaKnown RBP eCLIP11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 CCDC40Q4G0X9 1142 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 KLHDC9Q8NEP7 349 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 ASAP3Q8TDY4 903 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 BSNDQ8WZ55 320 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 LENG1Q96BZ8 264 aaPredicted RBP11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 CNOT6LQ96LI5 555 aaKnown RBP11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 TUBGCP2Q9BSJ2 902 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 AGPAT3Q9NRZ7 376 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 IMPACTQ9P2X3 320 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 PTPN22Q9Y2R2 807 aa11.59□□□□□ -0.55
NEDD4L-224ENST00000588712 MOXD2PA6NHM9 499 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 MAPK13O15264 365 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 PGK1P00558 417 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 EPB41P11171 864 aaKnown RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 GARTP22102 1010 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 PSMC2P35998 433 aaKnown RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 SOX10P56693 466 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 CAPSQ13938 189 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 NR1I3Q14994 352 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 KRT31Q15323 416 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 MAPK6Q16659 721 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 FKBP15Q5T1M5 1219 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 CDCA2Q69YH5 1023 aaPredicted RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 USP37Q86T82 979 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 ZNF410Q86VK4 478 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 IRF2BP1Q8IU81 584 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 RHPN2Q8IUC4 686 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 LINC01465Q8N7H1 131 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 BICD1Q96G01 975 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 KIAA1586Q9HCI6 787 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 SETD4Q9NVD3 440 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 AP5Z1O43299 807 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 PIGRP01833 764 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 COPB1P53618 953 aaKnown RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 PTPN11Q06124 597 aaPredicted RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 KCNA1Q09470 495 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 KCNA10Q16322 511 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 MAN2A1Q16706 1144 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 HSP90AA4PQ58FG1 418 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 MARCH8Q5T0T0 291 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 TAF2Q6P1X5 1199 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 ZPBP2Q6X784 338 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 SESTD1Q86VW0 696 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 LRRC71Q8N4P6 559 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 DNAJC5GQ8N7S2 189 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 RNF149Q8NC42 400 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 LMBR1Q8WVP7 490 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 TRAPPC12Q8WVT3 735 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 NOC4LQ9BVI4 516 aaKnown RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 INO80BQ9C086 356 aaPredicted RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 DMAC2Q9NW81 257 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 ARMCX3Q9UH62 379 aaPredicted RBP11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 AKT3Q9Y243 479 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 PTCH2Q9Y6C5 1203 aa11.58□□□□□ -0.56
NEDD4L-224ENST00000588712 ZMYM2Q9UBW7 1377 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 HNRNPDLO14979 420 aaKnown RBP11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 EXOC3O60645 756 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 LDHAP00338 332 aaKnown RBP11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 PTMAP06454 111 aaKnown RBP11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 SRGAP2CP0DJJ0 459 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 HOXC8P31273 242 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 LIG4P49917 911 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 PTENP60484 403 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 NCBP1Q09161 790 aaKnown RBP11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 PKN2Q16513 984 aaKnown RBP11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 ARMCX5Q6P1M9 558 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 SRGAP1Q7Z6B7 1085 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 RSPH3Q86UC2 560 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 XXYLT1Q8NBI6 393 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 IQCDQ96DY2 449 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 PRIMPOLQ96LW4 560 aa11.57□□□□□ -0.56
NEDD4L-224ENST00000588712 MRPL4Q9BYD3 311 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms