RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 PGBD4Q96DM1 585 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 XPNPEP1Q9NQW7 623 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 CLDND1Q9NY35 253 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 FAM50BQ9Y247 325 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 LZTS1Q9Y250 596 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 STK24Q9Y6E0 443 aa25.96■■□□□ 1.75
LSM7-204ENST00000587502 ARID2Q68CP9 1835 aa25.95■■□□□ 1.75
LSM7-204ENST00000587502 SPATA31C1P0DKV0 1188 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 ATF7P17544 494 aaPredicted RBP25.95■■□□□ 1.74
LSM7-204ENST00000587502 DNAJB1P25685 340 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 RPA1P27694 616 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 PLCB3Q01970 1234 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 HYAL1Q12794 435 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 CTC1Q2NKJ3 1217 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 HAUS3Q68CZ6 603 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 LRRC55Q6ZSA7 311 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 CATSPER3Q86XQ3 398 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 HELQQ8TDG4 1101 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 PIGOQ8TEQ8 1089 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 ZNF558Q96NG5 402 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 RAB34Q9BZG1 259 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 TLR9Q9NR96 1032 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 DBR1Q9UK59 544 aaKnown RBP25.95■■□□□ 1.74
LSM7-204ENST00000587502 BDP1A6H8Y1 2624 aa25.95■■□□□ 1.74
LSM7-204ENST00000587502 FSD2A1L4K1 749 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 ERLIN2O94905 339 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 AXLP30530 894 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 ARL2P36404 184 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 FXR2P51116 673 aaKnown RBP eCLIP25.94■■□□□ 1.74
LSM7-204ENST00000587502 PTENP60484 403 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 KRT17Q04695 432 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 KCNT2Q6UVM3 1135 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 GLB1LQ6UWU2 654 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 IFNLR1Q8IU57 520 aaPredicted RBP25.94■■□□□ 1.74
LSM7-204ENST00000587502 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.94■■□□□ 1.74
LSM7-204ENST00000587502 MICAL1Q8TDZ2 1067 aa25.94■■□□□ 1.74
LSM7-204ENST00000587502 LAD1O00515 517 aa25.93■■□□□ 1.74
LSM7-204ENST00000587502 MED24O75448 989 aa25.93■■□□□ 1.74
LSM7-204ENST00000587502 CSPG5O95196 566 aa25.93■■□□□ 1.74
LSM7-204ENST00000587502 PDIA5Q14554 519 aa25.93■■□□□ 1.74
LSM7-204ENST00000587502 PTCRAQ6ISU1 281 aaPredicted RBP25.93■■□□□ 1.74
LSM7-204ENST00000587502 MCPH1Q8NEM0 835 aa25.93■■□□□ 1.74
LSM7-204ENST00000587502 NFKBIZQ9BYH8 718 aa25.93■■□□□ 1.74
LSM7-204ENST00000587502 MINDY3Q9H8M7 445 aa25.93■■□□□ 1.74
LSM7-204ENST00000587502 SPG21Q9NZD8 308 aa25.93■■□□□ 1.74
LSM7-204ENST00000587502 C4orf32Q8N8J7 132 aa25.92■■□□□ 1.74
LSM7-204ENST00000587502 CNNM3Q8NE01 707 aa25.92■■□□□ 1.74
LSM7-204ENST00000587502 MRPS27Q92552 414 aaKnown RBP25.92■■□□□ 1.74
LSM7-204ENST00000587502 CCDC51Q96ER9 411 aa25.92■■□□□ 1.74
LSM7-204ENST00000587502 NECAB3Q96P71 396 aaPredicted RBP25.92■■□□□ 1.74
LSM7-204ENST00000587502 IGFLR1Q9H665 355 aa25.92■■□□□ 1.74
LSM7-204ENST00000587502 HCSTQ9UBK5 93 aa25.92■■□□□ 1.74
LSM7-204ENST00000587502 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.92■■□□□ 1.74
LSM7-204ENST00000587502 PCDHB2Q9Y5E7 798 aa25.92■■□□□ 1.74
LSM7-204ENST00000587502 ATG2AQ2TAZ0 1938 aa25.91■■□□□ 1.74
LSM7-204ENST00000587502 GRXCR2A6NFK2 248 aa25.91■■□□□ 1.74
LSM7-204ENST00000587502 H3BQ06 376 aaPredicted RBP25.91■■□□□ 1.74
LSM7-204ENST00000587502 HOXA11P31270 313 aaPredicted RBP25.91■■□□□ 1.74
LSM7-204ENST00000587502 IRS1P35568 1242 aa25.91■■□□□ 1.74
LSM7-204ENST00000587502 ALDH7A1P49419 539 aaKnown RBP25.91■■□□□ 1.74
LSM7-204ENST00000587502 MCTP1Q6DN14 999 aa25.91■■□□□ 1.74
LSM7-204ENST00000587502 CDCA3Q99618 268 aaPredicted RBP25.91■■□□□ 1.74
LSM7-204ENST00000587502 LRWD1Q9UFC0 647 aa25.91■■□□□ 1.74
LSM7-204ENST00000587502 CNTNAP2Q9UHC6 1331 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 H3BQV1 296 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 USO1O60763 962 aaKnown RBP25.9■■□□□ 1.74
LSM7-204ENST00000587502 GJB2P29033 226 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 TOB1P50616 345 aaPredicted RBP25.9■■□□□ 1.74
LSM7-204ENST00000587502 PTGDRQ13258 359 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 ADAM15Q13444 863 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 CAPSQ13938 189 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 RILPL1Q5EBL4 403 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 NOMO2Q5JPE7 1267 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 NOTUMQ6P988 496 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 MRPL10Q7Z7H8 261 aaKnown RBP25.9■■□□□ 1.74
LSM7-204ENST00000587502 EFHBQ8N7U6 833 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 ASAP3Q8TDY4 903 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 POLR3FQ9H1D9 316 aaPredicted RBP25.9■■□□□ 1.74
LSM7-204ENST00000587502 TLE6Q9H808 572 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 NGRNQ9NPE2 291 aaKnown RBP25.9■■□□□ 1.74
LSM7-204ENST00000587502 UBN1Q9NPG3 1134 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 SMC3Q9UQE7 1217 aa25.9■■□□□ 1.74
LSM7-204ENST00000587502 PLXNA4Q9HCM2 1894 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 ARHGEF35A5YM69 484 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 INO80B-WBP1J3KQ70 363 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 GLRA2P23416 452 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 LTBRP36941 435 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 NBR1Q14596 966 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 BMS1Q14692 1282 aaKnown RBP25.89■■□□□ 1.74
LSM7-204ENST00000587502 POTEGQ6S5H5 508 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 URGCPQ8TCY9 931 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 LPPQ93052 612 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 KANSL3Q9P2N6 904 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 PCDHB6Q9Y5E3 794 aa25.89■■□□□ 1.74
LSM7-204ENST00000587502 A0A087WWV3 80 aa25.88■■□□□ 1.73
LSM7-204ENST00000587502 FSCN2O14926 492 aa25.88■■□□□ 1.73
LSM7-204ENST00000587502 OFD1O75665 1012 aa25.88■■□□□ 1.73
LSM7-204ENST00000587502 CCT6AP40227 531 aaKnown RBP25.88■■□□□ 1.73
LSM7-204ENST00000587502 PRPHP41219 470 aa25.88■■□□□ 1.73
LSM7-204ENST00000587502 NRIP1P48552 1158 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms