RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SPATC1Q76KD6 591 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 RSPH3Q86UC2 560 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 CEP57Q86XR8 500 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 Q8N1Y9 231 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 KCTD13Q8WZ19 329 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 P3H4Q92791 437 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 PPP2R3CQ969Q6 453 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 LIN37Q96GY3 246 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-203ENST00000585448 NAP1L3Q99457 506 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-203ENST00000585448 LGR4Q9BXB1 951 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 BRD8Q9H0E9 1235 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 OSBPL5Q9H0X9 879 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-203ENST00000585448 ZNF552Q9H707 407 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-203ENST00000585448 FAM204AQ9H8W3 233 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 SLC39A2Q9NP94 309 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 EXOC1Q9NV70 894 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 ZNHIT6Q9NWK9 470 aaKnown RBP6.75□□□□□ -1.33
SMAD4-203ENST00000585448 CIDEBQ9UHD4 219 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 PAIP2BQ9ULR5 123 aaKnown RBP6.75□□□□□ -1.33
SMAD4-203ENST00000585448 L1RE1Q9UN81 338 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 TMED5Q9Y3A6 229 aa6.75□□□□□ -1.33
SMAD4-203ENST00000585448 CCDC141Q6ZP82 1450 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 TRAV20A0A0B4J274 112 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 RASSF10A6NK89 507 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 SRRM3A6NNA2 597 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 USP27XA6NNY8 438 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 GOLGA8AA7E2F4 631 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 SLC27A2O14975 620 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 MYO1BO43795 1136 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 SNRPB2P08579 225 aaKnown RBP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 GRIA2P42262 883 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 NEK2P51955 445 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 NLRP5P59047 1200 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 CYP4F8P98187 520 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 TMEM62Q0P6H9 643 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 IFRD2Q12894 506 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 CBX2Q14781 532 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 MYBPC3Q14896 1274 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 USH1GQ495M9 461 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 SH2D4BQ5SQS7 431 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 MPZL3Q6UWV2 235 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 RSPO2Q6UXX9 243 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 BZW1Q7L1Q6 419 aaKnown RBP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 CHD1LQ86WJ1 897 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 LRRC49Q8IUZ0 686 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 ZGPATQ8N5A5 531 aaKnown RBP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 ZBTB38Q8NAP3 1195 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 TMEM145Q8NBT3 493 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 MSANTD4Q8NCY6 345 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 NUP43Q8NFH3 380 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 GCC1Q96CN9 775 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 PPP1R13BQ96KQ4 1090 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 IWS1Q96ST2 819 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 CARD6Q9BX69 1037 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 EBF2Q9HAK2 575 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 GPRC5CQ9NQ84 441 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMAD4-203ENST00000585448 ATXN10Q9UBB4 475 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 HDAC6Q9UBN7 1215 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 NRBP1Q9UHY1 535 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 DDX19BQ9UMR2 479 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 DAAM1Q9Y4D1 1078 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 EFCAB5A4FU69 1503 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 KDM5DQ9BY66 1539 aa6.74□□□□□ -1.33
SMAD4-203ENST00000585448 POLR3AO14802 1390 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 TOP2BQ02880 1626 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 C7orf72A4D263 438 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 OR14I1A6ND48 311 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 LRRC10BA6NIK2 292 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 MYO1FO00160 1098 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 EIF3HO15372 352 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 NPHS1O60500 1241 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 URI1O94763 535 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 NPTXRO95502 500 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 VIMP08670 466 aaKnown RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 CCDC166P0CW27 439 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 TROVE2P10155 538 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 GNAT1P11488 350 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 KCNA2P16389 499 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 PSMC4P43686 418 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 GTF2A2P52657 109 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 RARSP54136 660 aaKnown RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 HDAC4P56524 1084 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 YBX1P67809 324 aaKnown RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 ADCY1Q08828 1119 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 SSRP1Q08945 709 aaKnown RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 MESP2Q0VG99 397 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 BLMHQ13867 455 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 GIMAP6Q6P9H5 292 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 OLFML1Q6UWY5 402 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 SESTD1Q86VW0 696 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 HOMER1Q86YM7 354 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 ZBTB8BQ8NAP8 495 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 WDR66Q8TBY9 1149 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 SLC35B4Q969S0 331 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 SRPK1Q96SB4 655 aaKnown RBP6.73□□□□□ -1.33
SMAD4-203ENST00000585448 TCHPQ9BT92 498 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 IER2Q9BTL4 223 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 RABEP2Q9H5N1 569 aa6.73□□□□□ -1.33
SMAD4-203ENST00000585448 PCDH18Q9HCL0 1135 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms