RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 SLC37A4O43826 429 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 CXCL14O95715 111 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 WEE2P0C1S8 567 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 GCFC2P16383 781 aaKnown RBP14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 RAB27AP51159 221 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 POLGP54098 1239 aaPredicted RBP14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 PTPN5P54829 565 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 ITIH3Q06033 890 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 SIGLEC14Q08ET2 396 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 LETM2Q2VYF4 491 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 GLB1LQ6UWU2 654 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 EXOC8Q8IYI6 725 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 FBXL6Q8N531 539 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 ATOH1Q92858 354 aaPredicted RBP14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 GBP3Q9H0R5 595 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 SLKQ9H2G2 1235 aaPredicted RBP14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 IFT122Q9HBG6 1241 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 CYP26B1Q9NR63 512 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 FAM105AQ9NUU6 356 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 FAM86C1Q9NVL1 165 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 KCNJ14Q9UNX9 436 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 PIN4Q9Y237 131 aaKnown RBP14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 INPP5FQ9Y2H2 1132 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 PPME1Q9Y570 386 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 IRAK3Q9Y616 596 aa14.07□□□□□ -0.16
SMARCD2-207ENST00000578234 CCDC194A0A1B0GVG4 234 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 TBX3O15119 743 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 CLASP2O75122 1294 aaKnown RBP14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 CDKL5O76039 1030 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 XBP1P17861 261 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 RBM25P49756 843 aaKnown RBP14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 AK2P54819 239 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 RNASELQ05823 741 aaKnown RBP14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 GIT2Q14161 759 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 PTPN21Q16825 1174 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 NOMO2Q5JPE7 1267 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 PLA2G4FQ68DD2 849 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 CATSPER4Q7RTX7 472 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 DDX53Q86TM3 631 aaKnown RBP14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 KSR1Q8IVT5 923 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 VPS52Q8N1B4 723 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 PRSS33Q8NF86 280 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 SLC7A3Q8WY07 619 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 PGBD4Q96DM1 585 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 NLRP4Q96MN2 994 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 NECTIN4Q96NY8 510 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 KIF2CQ99661 725 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 PRRX2Q99811 253 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 ADAM7Q9H2U9 754 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 CDH22Q9UJ99 828 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 VAV3Q9UKW4 847 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 NR2E1Q9Y466 385 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 ZDBF2Q9HCK1 2354 aa14.06□□□□□ -0.16
SMARCD2-207ENST00000578234 OFD1O75665 1012 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 P4HBP07237 508 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 GALTP07902 379 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 CTSAP10619 480 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 NPEPPSP55786 919 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 SCRN1Q12765 414 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 RARS2Q5T160 578 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 SRGAP1Q7Z6B7 1085 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 C4orf19Q8IY42 314 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 C12orf76Q8N812 135 aaPredicted RBP14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 PRPF31Q8WWY3 499 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 LPPQ93052 612 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 ASIC4Q96FT7 647 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 IGSF21Q96ID5 467 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 NAP1L4Q99733 375 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 ZBP1Q9H171 429 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 DHX33Q9H6R0 707 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 NRDE2Q9H7Z3 1164 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 AGPAT5Q9NUQ2 364 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 TBC1D13Q9NVG8 400 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 COL4A3BPQ9Y5P4 624 aa14.05□□□□□ -0.16
SMARCD2-207ENST00000578234 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 MEIS3P2A8K0S8 358 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 ASAP2O43150 1006 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 GAS2O43903 313 aaKnown RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 MARCH6O60337 910 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 DTNBO60941 627 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 SSBP05455 408 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 RFC5P40937 340 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 MTHFRP42898 656 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 VCPP55072 806 aaKnown RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 EPHA7Q15375 998 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 OTUD6AQ7L8S5 288 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 MRPL10Q7Z7H8 261 aaKnown RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 TMEM173Q86WV6 379 aaPredicted RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 ZNF579Q8NAF0 562 aaKnown RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 KREMEN2Q8NCW0 462 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 PSPC1Q8WXF1 523 aaKnown RBP14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 AUTS2Q8WXX7 1259 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 HAS1Q92839 578 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 CEP170P1Q96L14 293 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 TBC1D32Q96NH3 1257 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 POMKQ9H5K3 350 aa14.04□□□□□ -0.16
SMARCD2-207ENST00000578234 DZANK1Q9NVP4 752 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms