RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 HAPLN2Q9GZV7 340 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 L2HGDHQ9H9P8 463 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 POLR3BQ9NW08 1133 aaPredicted RBP6.11□□□□□ -1.43
LINC00560-201ENST00000564593 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.11□□□□□ -1.43
LINC00560-201ENST00000564593 RAPGEFL1Q9UHV5 662 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 A0A0A6YYK5 440 aaPredicted RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 SLC16A1P53985 500 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 TBX4P57082 545 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 UAP1L1Q3KQV9 507 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 MINDY4Q4G0A6 757 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 LMBR1LQ6UX01 489 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 ATG14Q6ZNE5 492 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 GLB1L2Q8IW92 636 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 LRRC56Q8IYG6 542 aaPredicted RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 BCL6BQ8N143 479 aaPredicted RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 AIFM3Q96NN9 605 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 SOX7Q9BT81 388 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 EPB41L4AQ9HCS5 686 aaPredicted RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 GABBR1Q9UBS5 961 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 DNAI1Q9UI46 699 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 CNOT6Q9ULM6 557 aaKnown RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 DDX3XO00571 662 aaKnown RBP eCLIP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 MED14OSP0DP75 135 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 ZNF28P17035 718 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 PI3P19957 117 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 AKAP5P24588 427 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 RPL13P26373 211 aaKnown RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 POLD1P28340 1107 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 BUD31P41223 144 aaPredicted RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 KCNQ1P51787 676 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 MALLQ13021 153 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 ADRM1Q16186 407 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 MUM1L1Q5H9M0 696 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 IFIT1BQ5T764 474 aaKnown RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 EPM2AIP1Q7L775 607 aaPredicted RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 WDR92Q96MX6 357 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 PPP1R16BQ96T49 567 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 FDXACB1Q9BRP7 624 aaPredicted RBP6.1□□□□□ -1.43
LINC00560-201ENST00000564593 DNM3Q9UQ16 869 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
LINC00560-201ENST00000564593 TCAF2A6NFQ2 919 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 SEC24DO94855 1032 aaPredicted RBP6.09□□□□□ -1.43
LINC00560-201ENST00000564593 KLHL18O94889 574 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 HSPA6P17066 643 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 LPOP22079 712 aaPredicted RBP6.09□□□□□ -1.43
LINC00560-201ENST00000564593 STAT5BP51692 787 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 MGAT5Q09328 741 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 EIF4HQ15056 248 aaKnown RBP6.09□□□□□ -1.43
LINC00560-201ENST00000564593 MAN2A1Q16706 1144 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 BTNL9Q6UXG8 535 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 TTLL10Q6ZVT0 673 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 SAPCD2Q86UD0 394 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 IFNL2Q8IZJ0 200 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 GLB1L3Q8NCI6 653 aaPredicted RBP6.09□□□□□ -1.43
LINC00560-201ENST00000564593 ZNF526Q8TF50 670 aaPredicted RBP6.09□□□□□ -1.43
LINC00560-201ENST00000564593 COA7Q96BR5 231 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 ANLNQ9NQW6 1124 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 SERPINB13Q9UIV8 391 aa6.09□□□□□ -1.43
LINC00560-201ENST00000564593 VSTM5A8MXK1 200 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 OFD1O75665 1012 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 FSBPO95073 299 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 HMGCRP04035 888 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 POU2F2P09086 479 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 CD69Q07108 199 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 TOP3AQ13472 1001 aaPredicted RBP6.08□□□□□ -1.44
LINC00560-201ENST00000564593 NUDT10Q8NFP7 164 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 PPP1R14CQ8TAE6 165 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 NRG4Q8WWG1 115 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 NUDT11Q96G61 164 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 PAWRQ96IZ0 340 aaKnown RBP6.08□□□□□ -1.44
LINC00560-201ENST00000564593 ADI1Q9BV57 179 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 OSBPL6Q9BZF3 934 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 GREM2Q9H772 168 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 NMRK2Q9NPI5 230 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 NTMQ9P121 344 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 SAP30BPQ9UHR5 308 aaKnown RBP6.08□□□□□ -1.44
LINC00560-201ENST00000564593 RCAN3Q9UKA8 241 aa6.08□□□□□ -1.44
LINC00560-201ENST00000564593 SMG5Q9UPR3 1016 aaKnown RBP6.08□□□□□ -1.44
LINC00560-201ENST00000564593 RFXAPO00287 272 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 AP1G1O43747 822 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 ZSCAN22P10073 491 aaPredicted RBP6.07□□□□□ -1.44
LINC00560-201ENST00000564593 HNRNPLP14866 589 aaKnown RBP eCLIP6.07□□□□□ -1.44
LINC00560-201ENST00000564593 GSPT1P15170 499 aaKnown RBP6.07□□□□□ -1.44
LINC00560-201ENST00000564593 GNALP38405 381 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 MCAMP43121 646 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 ETV4P43268 484 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 DLX2Q07687 328 aaPredicted RBP6.07□□□□□ -1.44
LINC00560-201ENST00000564593 CATIPQ7Z7H3 387 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 RTKN2Q8IZC4 609 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 NKD2Q969F2 451 aaPredicted RBP6.07□□□□□ -1.44
LINC00560-201ENST00000564593 TMEM168Q9H0V1 697 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 DMRT3Q9NQL9 472 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 SCOCQ9UIL1 159 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 INTUQ9ULD6 942 aa6.07□□□□□ -1.44
LINC00560-201ENST00000564593 DAPK3O43293 454 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 LY86O95711 162 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 KRT1P04264 644 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 CYP1A1P04798 512 aaPredicted RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 C1QTNF9P0C862 333 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 PDCP20941 246 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms