RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 SPPL3Q8TCT6 385 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 NECAB3Q96P71 396 aaPredicted RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 MTMR9Q96QG7 549 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 LLPHQ9BRT6 129 aaKnown RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 LXNQ9BS40 222 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 TMEM117Q9H0C3 514 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 CWH43Q9H720 699 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 IFT122Q9HBG6 1241 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 RRAGDQ9NQL2 400 aaPredicted RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 XPNPEP1Q9NQW7 623 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 CYP26B1Q9NR63 512 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 NRBP2Q9NSY0 501 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 HCSTQ9UBK5 93 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 SEPT9Q9UHD8 586 aaPredicted RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 NOL7Q9UMY1 257 aaKnown RBP7.7□□□□□ -1.18
SPG11-224ENST00000561268 PLAGL2Q9UPG8 496 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 LZTS1Q9Y250 596 aa7.7□□□□□ -1.18
SPG11-224ENST00000561268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 A0A0U1RQF3 1178 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 DENND3A2RUS2 1198 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 GRXCR2A6NFK2 248 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 INPPL1O15357 1258 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 HOXA2O43364 376 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 NCK2O43639 380 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 RRP9O43818 475 aaKnown RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 CCNT1O60563 726 aaKnown RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 GLP2RO95838 553 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 P4HBP07237 508 aaKnown RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 NUDT7P0C024 238 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 LAG3P18627 525 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 RFC5P40937 340 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 NEK4P51957 841 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 PLCB3Q01970 1234 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 NFX1Q12986 1120 aaKnown RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 PUS10Q3MIT2 529 aaKnown RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 ZSCAN23Q3MJ62 389 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 MTERF2Q49AM1 385 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 PLA2G4FQ68DD2 849 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 FAM178BQ8IXR5 827 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 DIS3L2Q8IYB7 885 aaKnown RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 METTL13Q8N6R0 699 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 COLGALT1Q8NBJ5 622 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 TMX3Q96JJ7 454 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 MSLNLQ96KJ4 702 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 CASD1Q96PB1 797 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 JPH2Q9BR39 696 aaPredicted RBP7.69□□□□□ -1.18
SPG11-224ENST00000561268 NFKBIZQ9BYH8 718 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 BRMS1Q9HCU9 246 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 CHST12Q9NRB3 414 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 AGPAT5Q9NUQ2 364 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 AKT3Q9Y243 479 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 NOTCH4Q99466 2003 aa7.69□□□□□ -1.18
SPG11-224ENST00000561268 DENND4CQ5VZ89 1909 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 BTBD18B2RXH4 712 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 NEMFO60524 1076 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 DTNBO60941 627 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 ZNF623O75123 536 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 EYA4O95677 639 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 EOMESO95936 686 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 FGFR1P11362 822 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 IL9P15248 144 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 KCNA5P22460 613 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 SFPQP23246 707 aaKnown RBP eCLIP7.68□□□□□ -1.18
SPG11-224ENST00000561268 YWHABP31946 246 aaKnown RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 IRS1P35568 1242 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 RAB27AP51159 221 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 HMGN5P82970 282 aaKnown RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 ZP2Q05996 745 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 POU5F1BQ06416 359 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 EMC2Q15006 297 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 PCBP1Q15365 356 aaKnown RBP eCLIP7.68□□□□□ -1.18
SPG11-224ENST00000561268 SKIV2LQ15477 1246 aaKnown RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 SMAD2Q15796 467 aaKnown RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 PAN2Q504Q3 1202 aaKnown RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 FAM102BQ5T8I3 360 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 LRRC55Q6ZSA7 311 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 MTERF4Q7Z6M4 381 aaKnown RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 ADGRD2Q7Z7M1 963 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 GAS2L3Q86XJ1 694 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 EXOC8Q8IYI6 725 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 EFHBQ8N7U6 833 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 KLHL23Q8NBE8 558 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 SMRP1Q8NCR6 262 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 POF1BQ8WVV4 589 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 ZSCAN31Q96LW9 406 aaPredicted RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 PPP1R16BQ96T49 567 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 HSD17B14Q9BPX1 270 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 GZF1Q9H116 711 aaPredicted RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 CD320Q9NPF0 282 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 C11orf16Q9NQ32 467 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 SH2B1Q9NRF2 756 aaPredicted RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 DACT1Q9NYF0 836 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 PRKAG3Q9UGI9 489 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 LIMCH1Q9UPQ0 1083 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 GINS2Q9Y248 185 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.68□□□□□ -1.18
SPG11-224ENST00000561268 PCDHB7Q9Y5E2 793 aa7.68□□□□□ -1.18
SPG11-224ENST00000561268 COL4A3BPQ9Y5P4 624 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms