RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 SRPRBQ9Y5M8 271 aaKnown RBP13.4□□□□□ -0.26
USP8-212ENST00000560730 LRRIQ4A6NIV6 560 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 INO80B-WBP1J3KQ70 363 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 FOSL2P15408 326 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 ATF7P17544 494 aaPredicted RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 UBA7P41226 1012 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 MBTD1Q05BQ5 628 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 BTG3Q14201 252 aaPredicted RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 AMHR2Q16671 573 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 ZNF598Q86UK7 904 aaKnown RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 DAW1Q8N136 415 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 GDPD5Q8WTR4 605 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 GAS2L1Q99501 681 aaPredicted RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 NT5C3AQ9H0P0 336 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 BLOC1S4Q9NUP1 217 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 TMEM161AQ9NX61 479 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 A0A0U1RQF3 1178 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 B4GALT5O43286 388 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 TSPAN1O60635 241 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 LPXNO60711 386 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 HIP1RO75146 1068 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP8-212ENST00000560730 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 PLCG1P19174 1290 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 IGFBP4P22692 258 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 MAPK7Q13164 816 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 LONRF3Q496Y0 759 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 EPC2Q52LR7 807 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 UBXN11Q5T124 520 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 TWF2Q6IBS0 349 aaKnown RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 TMEM192Q8IY95 271 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 SYT2Q8N9I0 419 aaPredicted RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 CPB2Q96IY4 423 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 NFKBIZQ9BYH8 718 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 CCSER1Q9C0I3 900 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 ELAC1Q9H777 363 aaKnown RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
USP8-212ENST00000560730 MRPL42Q9Y6G3 142 aaKnown RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 MORC2Q9Y6X9 1032 aaPredicted RBP13.39□□□□□ -0.27
USP8-212ENST00000560730 TRANK1O15050 2925 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 NPHP3-ACAD11A0A0J9YXS1 232 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 TBKBP1A7MCY6 615 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 MEIS3P2A8K0S8 358 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 SFI1A8K8P3 1242 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 SLC26A4O43511 780 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 ERLIN2O94905 339 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
USP8-212ENST00000560730 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 MCM6Q14566 821 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 STK38Q15208 465 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 ARSHQ5FYA8 562 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 CLLU1OSQ5K130 101 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 CDCA2Q69YH5 1023 aaPredicted RBP13.38□□□□□ -0.27
USP8-212ENST00000560730 CMTR2Q8IYT2 770 aaKnown RBP13.38□□□□□ -0.27
USP8-212ENST00000560730 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 CLP1Q92989 425 aaKnown RBP13.38□□□□□ -0.27
USP8-212ENST00000560730 LPPQ93052 612 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 CALML4Q96GE6 196 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 CASD1Q96PB1 797 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 KIFC3Q9BVG8 833 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 TRAIPQ9BWF2 469 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 USP20Q9Y2K6 914 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 ATG2AQ2TAZ0 1938 aa13.38□□□□□ -0.27
USP8-212ENST00000560730 SPTLC2O15270 562 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 BRD1O95696 1058 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 EOMESO95936 686 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 EDN1P05305 212 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 ARF4P18085 180 aaPredicted RBP13.37□□□□□ -0.27
USP8-212ENST00000560730 BMPR1AP36894 532 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 NAMPTP43490 491 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
USP8-212ENST00000560730 DHX8Q14562 1220 aaKnown RBP13.37□□□□□ -0.27
USP8-212ENST00000560730 CDR2LQ86X02 465 aaPredicted RBP13.37□□□□□ -0.27
USP8-212ENST00000560730 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
USP8-212ENST00000560730 MAFAQ8NHW3 353 aaPredicted RBP13.37□□□□□ -0.27
USP8-212ENST00000560730 KIFAP3Q92845 792 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 EIF2AQ9BY44 585 aaKnown RBP13.37□□□□□ -0.27
USP8-212ENST00000560730 FZD8Q9H461 694 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 FAM105AQ9NUU6 356 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 COL6A3P12111 3177 aa13.37□□□□□ -0.27
USP8-212ENST00000560730 A0A087X0B3 334 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 ZNF623O75123 536 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 LIG1P18858 919 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 GUCY2CP25092 1073 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 CTNNB1P35222 781 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 PEX3P56589 373 aa13.36□□□□□ -0.27
USP8-212ENST00000560730 BECN1Q14457 450 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms