RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 STK39Q9UEW8 545 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GIMAP2Q9UG22 337 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 PPT2Q9UMR5 302 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 GIT1Q9Y2X7 761 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 SLC4A7Q9Y6M7 1214 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 CGNL1Q0VF96 1302 aa4.97□□□□□ -1.61
HMGB3P26-201ENST00000560051 DYNC1I1O14576 645 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 PMM2O15305 246 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 SLC7A4O43246 635 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 CEP104O60308 925 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 GREM1O60565 184 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 CPNE3O75131 537 aaKnown RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 ZNF254O75437 659 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 PAHP00439 452 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 MT-ND3P03897 115 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 MYCLP12524 364 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 HOXC12P31275 282 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 MCM5P33992 734 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 KRT9P35527 623 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 PHKA1P46020 1223 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 GIPRP48546 466 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 MRE11P49959 708 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 ATXN1P54253 815 aaKnown RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 GABPB1Q06547 395 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 G3BP1Q13283 466 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 SCARB2Q14108 478 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 PTPN21Q16825 1174 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 TUBB8Q3ZCM7 444 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 SUPT20HL1Q3ZLR7 823 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 KRTCAP3Q53RY4 240 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 TMEM67Q5HYA8 995 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 KCNT1Q5JUK3 1230 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 KRBOX4Q5JUW0 171 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 HHATQ5VTY9 493 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 PRPF40BQ6NWY9 871 aaKnown RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 PPP1R21Q6ZMI0 780 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 SPOCD1Q6ZMY3 1216 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 PLEKHM3Q6ZWE6 761 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 B4GALNT4Q76KP1 1039 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 TMEM110Q86TL2 294 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 CEP57Q86XR8 500 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 UNC45BQ8IWX7 931 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 CBARPQ8N350 705 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 TTC39CQ8N584 583 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 ATP11CQ8NB49 1132 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 DENND6BQ8NEG7 585 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 CCDC26Q8TAB7 109 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 NETO1Q8TDF5 533 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 SSH3Q8TE77 659 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 DIS3LQ8TF46 1054 aaKnown RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 POF1BQ8WVV4 589 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 KIF1BPQ96EK5 621 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 TMEM74Q96NL1 305 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 TUBA1CQ9BQE3 449 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 TTPALQ9BTX7 342 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 ACSS3Q9H6R3 686 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 AGO4Q9HCK5 861 aaKnown RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 DDX20Q9UHI6 824 aaKnown RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 TRHDEQ9UKU6 1024 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 HPCAL4Q9UM19 191 aa4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 SOS1Q07889 1333 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P26-201ENST00000560051 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 A0A087WZG4 1122 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 A0A096LPE4 126 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 A0A0B4J269 797 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 A0A1W2PPZ6 126 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 FAM155AB1AL88 458 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 F5H0A9 414 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 H7C0S8 307 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 NCAM2O15394 837 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 GPR39O43194 453 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 STX6O43752 255 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 TGDSO95455 350 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 PLATP00750 562 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 SLC4A1P02730 911 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 APOA4P06727 396 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 ETV1P50549 477 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 RRP1P56182 461 aaKnown RBP4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 EIF6P56537 245 aaKnown RBP4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 PPP2R3AQ06190 1150 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 ADCY1Q08828 1119 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 STRN3Q13033 797 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 LAPTM5Q13571 262 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 PDE3AQ14432 1141 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 RCN1Q15293 331 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 IMMTQ16891 758 aaKnown RBP4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 CCDC14Q49A88 953 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 ATP13A4Q4VNC1 1196 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 ARHGAP29Q52LW3 1261 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 ZBTB41Q5SVQ8 909 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 CCDC183Q5T5S1 534 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 SFMBT2Q5VUG0 894 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 DIEXFQ68CQ4 756 aaKnown RBP4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 CYB5RLQ6IPT4 315 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 CNNM4Q6P4Q7 775 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 NXPE4Q6UWF7 544 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 OLFML1Q6UWY5 402 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 ZNF574Q6ZN55 896 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 DGLUCYQ7Z3D6 616 aa4.95□□□□□ -1.62
HMGB3P26-201ENST00000560051 FAM114A1Q8IWE2 563 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms