RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ERP27Q96DN0 273 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 DCDC2Q9UHG0 476 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RPS6P62753 249 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 CCDC153Q494R4 210 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 SH3GLB1Q9Y371 365 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 FUT11Q495W5 492 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 USP49Q70CQ1 688 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 WASLO00401 505 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 VCPP55072 806 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 ROR2Q01974 943 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 POU5F1BQ06416 359 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 DDR1Q08345 913 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TRAPPC11Q7Z392 1133 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 RFWD2Q8NHY2 731 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 AGAP11Q8TF27 550 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PPP1R36Q96LQ0 422 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 HACD3Q9P035 362 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PTDSS1P48651 473 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 IDI1Q13907 227 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 EIF4A2Q14240 407 aaKnown RBP3.92□□□□□ -1.78
ATXN3-248ENST00000558190 ACAD11Q709F0 780 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 PLEKHG4BQ96PX9 1271 aa3.92□□□□□ -1.78
ATXN3-248ENST00000558190 TSC22D2O75157 780 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ADORA1P30542 326 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CLK1P49759 484 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ADCY7P51828 1080 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 DEFA1P59665 94 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 DEFA3P59666 94 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 GOLGA8QA0A0J9YX86 632 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 GOLGA8OA6NCC3 632 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 GOLGA8NF8WBI6 632 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CLOCKO15516 846 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 LARGE1O95461 756 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 HSPA4LO95757 839 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 COILP38432 576 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 C4orf33Q8N1A6 199 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 STK33Q9BYT3 514 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ILKAPQ9H0C8 392 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 MMADHCQ9H3L0 296 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 KANSL2Q9H9L4 492 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 POTEB3A0JP26 581 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 BCL10O95999 233 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CYP2E1P05181 493 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TAF1BQ53T94 588 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 POTEBQ6S5H4 581 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 NSMFQ6X4W1 530 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 IFNEQ86WN2 208 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ANKMY2Q8IV38 441 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 DKK3Q9UBP4 350 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ANGPTL3Q9Y5C1 460 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PITPNM2Q9BZ72 1349 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TSGA10IPQ3SY00 556 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 WDR93Q6P2C0 686 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ELOA2Q8IYF1 753 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 OTULINQ96BN8 352 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 BSDC1Q9NW68 430 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 GDAQ9Y2T3 454 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CCDC188H7C350 402 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 FXR1P51114 621 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ODR4Q5SWX8 454 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ADGRF5Q8IZF2 1346 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 P3H1Q32P28 736 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF554Q86TJ5 538 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CATSPER1Q8NEC5 780 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ENGASEQ8NFI3 743 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CPA5Q8WXQ8 436 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TUBGCP3Q96CW5 907 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PCDHA4Q9UN74 947 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 AOX1Q06278 1338 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 A0A0D9SFI3 127 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 MDH1BQ5I0G3 518 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ZMYM1Q5SVZ6 1142 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ITPRIPL1Q6GPH6 555 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 KLC2Q9H0B6 622 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 DIABLOQ9NR28 239 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 IRGCQ6NXR0 463 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ATG14Q6ZNE5 492 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 C16orf62Q7Z3J2 963 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CDH24Q86UP0 819 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 SCN3BQ9NY72 215 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 DTNAQ9Y4J8 743 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 WDR47O94967 919 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 MAGP20916 626 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 POLGP54098 1239 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TTC8Q8TAM2 541 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PSPC1Q8WXF1 523 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TSPAN18Q96SJ8 248 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ZMYND8Q9ULU4 1186 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CPP00450 1065 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 TMEM110Q86TL2 294 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 MAML3Q96JK9 1138 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 COG4Q9H9E3 785 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 LDHBP07195 334 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 NR1H2P55055 460 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 CACNB1Q02641 598 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 KHDC1Q4VXA5 237 aaKnown RBP3.91□□□□□ -1.78
ATXN3-248ENST00000558190 PARVAQ9NVD7 372 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 ING4Q9UNL4 249 aa3.91□□□□□ -1.78
ATXN3-248ENST00000558190 NPHP3-ACAD11A0A0J9YXS1 232 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms