RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MAGEB2O15479 319 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 CDC42EP1Q00587 391 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 DACT2Q5SW24 774 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 BBOF1Q8ND07 529 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 HSPBP1Q9NZL4 362 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 CREB3O43889 395 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 THPOP40225 353 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 ALKBH5Q6P6C2 394 aaKnown RBP18.6■□□□□ 0.57
PTPN21-208ENST00000556564 RAPH1Q70E73 1250 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 GLT1D1Q96MS3 346 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 CNOT8Q9UFF9 292 aaKnown RBP18.6■□□□□ 0.57
PTPN21-208ENST00000556564 PCDHB7Q9Y5E2 793 aa18.6■□□□□ 0.57
PTPN21-208ENST00000556564 LRRC53A6NM62 1247 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 NDUFA10O95299 355 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 ITGA4P13612 1032 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 C2orf54Q08AI8 447 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 ZMYND12Q9H0C1 365 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 ANAPC7Q9UJX3 599 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 TBX3O15119 743 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 MYBP10242 640 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 CASP7P55210 303 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 USP50Q70EL3 339 aaPredicted RBP18.59■□□□□ 0.57
PTPN21-208ENST00000556564 CCDC170Q8IYT3 715 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 GDAP1Q8TB36 358 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 C11orf70Q9BRQ4 267 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 TRPC7Q9HCX4 862 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 AGAP1Q9UPQ3 857 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 RFC5P40937 340 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 GARSP41250 739 aaKnown RBP18.59■□□□□ 0.57
PTPN21-208ENST00000556564 CDCA5Q96FF9 252 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 MOCS2O96007 188 aaPredicted RBP18.59■□□□□ 0.57
PTPN21-208ENST00000556564 MICALL1Q8N3F8 863 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 MAP3K14Q99558 947 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 TIPINQ9BVW5 301 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 EHD4Q9H223 541 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 VPS33BQ9H267 617 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 ESYT2A0FGR8 921 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 LGALS16A8MUM7 142 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 CPP00450 1065 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 ERCC6LQ2NKX8 1250 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 ZNF746Q6NUN9 644 aaPredicted RBP18.59■□□□□ 0.57
PTPN21-208ENST00000556564 SPATA2LQ8IUW3 424 aaPredicted RBP18.59■□□□□ 0.57
PTPN21-208ENST00000556564 CDKL2Q92772 493 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 RUNDC3BQ96NL0 473 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 TMX2Q9Y320 296 aa18.59■□□□□ 0.57
PTPN21-208ENST00000556564 IFT172Q9UG01 1749 aa18.58■□□□□ 0.57
PTPN21-208ENST00000556564 GOLGA8CPA6NN73 597 aa18.58■□□□□ 0.57
PTPN21-208ENST00000556564 POC1B-GALNT4F8VUJ3 575 aa18.58■□□□□ 0.57
PTPN21-208ENST00000556564 KRT10P13645 584 aa18.58■□□□□ 0.57
PTPN21-208ENST00000556564 MROH8Q9H579 483 aa18.58■□□□□ 0.57
PTPN21-208ENST00000556564 HBP1O60381 514 aa18.58■□□□□ 0.57
PTPN21-208ENST00000556564 ATN1P54259 1190 aaPredicted RBP18.58■□□□□ 0.57
PTPN21-208ENST00000556564 ACTR2P61160 394 aa18.58■□□□□ 0.57
PTPN21-208ENST00000556564 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.58■□□□□ 0.57
PTPN21-208ENST00000556564 CALCOCO1Q9P1Z2 691 aa18.58■□□□□ 0.57
PTPN21-208ENST00000556564 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
PTPN21-208ENST00000556564 DRAP1Q14919 205 aaPredicted RBP18.58■□□□□ 0.56
PTPN21-208ENST00000556564 CEP85LQ5SZL2 805 aa18.58■□□□□ 0.56
PTPN21-208ENST00000556564 TOGARAM2Q6ZUX3 1019 aa18.58■□□□□ 0.56
PTPN21-208ENST00000556564 WTIPA6NIX2 430 aaPredicted RBP18.58■□□□□ 0.56
PTPN21-208ENST00000556564 FAM83AQ86UY5 434 aa18.58■□□□□ 0.56
PTPN21-208ENST00000556564 GMCL1P1Q8NEA9 526 aa18.58■□□□□ 0.56
PTPN21-208ENST00000556564 GFPT1Q06210 699 aaPredicted RBP18.57■□□□□ 0.56
PTPN21-208ENST00000556564 TMEM132DQ14C87 1099 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 VEPH1Q14D04 833 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 CFAP36Q96G28 342 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 TRIM56Q9BRZ2 755 aaKnown RBP18.57■□□□□ 0.56
PTPN21-208ENST00000556564 PPP1R9AQ9ULJ8 1098 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 MFAP3LO75121 409 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 TMEM60Q9H2L4 133 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 ECEL1O95672 775 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 ZC2HC1CQ53FD0 456 aaPredicted RBP18.57■□□□□ 0.56
PTPN21-208ENST00000556564 ANKRD40Q6AI12 368 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 ABCF3Q9NUQ8 709 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 EFCAB8A8MWE9 144 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 NPTXRO95502 500 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 S100BP04271 92 aaPredicted RBP18.57■□□□□ 0.56
PTPN21-208ENST00000556564 SMARCA1P28370 1054 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 ETF1P62495 437 aaKnown RBP18.57■□□□□ 0.56
PTPN21-208ENST00000556564 GPRASP2Q96D09 838 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 SALL1Q9NSC2 1324 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 ATF7IP2Q5U623 682 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 APPL2Q8NEU8 664 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 HPS5Q9UPZ3 1129 aa18.57■□□□□ 0.56
PTPN21-208ENST00000556564 GSTA1P08263 222 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 GSTA2P09210 222 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 AP1M1Q9BXS5 423 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 DDX4Q9NQI0 724 aaKnown RBP18.56■□□□□ 0.56
PTPN21-208ENST00000556564 ASNSD1Q9NWL6 643 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 MAFGO15525 162 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 ZBED1O96006 694 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 OR1G1P47890 313 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 ZNF131P52739 623 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 PSMC1P62191 440 aaKnown RBP18.56■□□□□ 0.56
PTPN21-208ENST00000556564 MUM1L1Q5H9M0 696 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 GUF1Q8N442 669 aaKnown RBP18.56■□□□□ 0.56
PTPN21-208ENST00000556564 CYP2C8P10632 490 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 NXNQ6DKJ4 435 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 PPP4R1Q8TF05 950 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 RILPQ96NA2 401 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms