RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SSBP05455 408 aaKnown RBP eCLIP7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 STAG3L1P0CL83 205 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 METAP2P50579 478 aaKnown RBP eCLIP7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 AFF1P51825 1210 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 ZXDAP98168 799 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 KCNH2Q12809 1159 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 TCF15Q12870 199 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 DSC3Q14574 896 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 EFCAB12Q6NXP0 572 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 SYNE3Q6ZMZ3 975 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 DHX32Q7L7V1 743 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 TMTC2Q8N394 836 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 BRF1Q92994 677 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 JAKMIP1Q96N16 626 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 PLVAPQ9BX97 442 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 LMAN2LQ9H0V9 348 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 S1PR5Q9H228 398 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 ADAMTS10Q9H324 1103 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 ATP6V0A4Q9HBG4 840 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 ENTPD7Q9NQZ7 604 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 TLR9Q9NR96 1032 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 VPS54Q9P1Q0 977 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 FCF1Q9Y324 198 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 PCDHB12Q9Y5F1 795 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 PTPRZ1P23471 2315 aaPredicted RBP7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 MYO10Q9HD67 2058 aa7.75□□□□□ -1.17
PRPF40B-214ENST00000551320 RIF1Q5UIP0 2472 aaKnown RBP7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 A0A087WWV3 80 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 H0Y858 1186 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 FSCN2O14926 492 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 MSH4O15457 936 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 ATF7P17544 494 aaPredicted RBP7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 COASYQ13057 564 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 DUSP6Q16828 381 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 RARS2Q5T160 578 aaKnown RBP7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 FAM160B1Q5W0V3 765 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 ANKRD54Q6NXT1 300 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 MIS18BP1Q6P0N0 1132 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 KCNT2Q6UVM3 1135 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 SLC24A5Q71RS6 500 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 TMC7Q7Z402 723 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 CRYGNQ8WXF5 182 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 P2RX5Q93086 422 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 LENG9Q96B70 501 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 SCLT1Q96NL6 688 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 SLC26A6Q9BXS9 759 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 FTHL17Q9BXU8 183 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 UPF3BQ9BZI7 483 aaKnown RBP7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 GBP3Q9H0R5 595 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 UNC45AQ9H3U1 944 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 POMKQ9H5K3 350 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 AAASQ9NRG9 546 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 GJB4Q9NTQ9 266 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 FAM50BQ9Y247 325 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 INPP5FQ9Y2H2 1132 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 RWDD3Q9Y3V2 267 aa7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 MAFBQ9Y5Q3 323 aaPredicted RBP7.74□□□□□ -1.17
PRPF40B-214ENST00000551320 C2CD4DB7Z1M9 353 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 F8W810 466 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 MAFGO15525 162 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 NCK2O43639 380 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 TDP2O95551 362 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 BRD1O95696 1058 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 EPCAMP16422 314 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 CRYBB1P53674 252 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 FAM189BP81408 668 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 FGD1P98174 961 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 PRKCEQ02156 737 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 STK3Q13188 491 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 PFKFB3Q16875 520 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 MTERF2Q49AM1 385 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 ZNF484Q5JVG2 852 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 PLA2G4FQ68DD2 849 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 ZBTB33Q86T24 672 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 ECHDC2Q86YB7 292 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 NME8Q8N427 588 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 SUSD6Q92537 303 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 RABGGTAQ92696 567 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 ASIC4Q96FT7 647 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 CCDC136Q96JN2 1154 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 MFSD14AQ96MC6 490 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 PHF7Q9BWX1 381 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 VN1R3Q9BXE9 311 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 DNAJB4Q9UDY4 337 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 FKBPLQ9UIM3 349 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 SNX14Q9Y5W7 946 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 KDM3AQ9Y4C1 1321 aa7.73□□□□□ -1.17
PRPF40B-214ENST00000551320 A0A087WZ62 844 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 C2orf71A6NGG8 1288 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 RNF223E7ERA6 249 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 ZBTB39O15060 712 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 GPR182O15218 404 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 CLASP2O75122 1294 aaKnown RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 ZC3H11AO75152 810 aaKnown RBP eCLIP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 STBD1O95210 358 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 CXCL14O95715 111 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 FOSP01100 380 aaPredicted RBP7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 PSAPP07602 524 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 SPATA31D3P0C874 917 aa7.72□□□□□ -1.17
PRPF40B-214ENST00000551320 NPEPPSP55786 919 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms