RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 ZNF507Q8TCN5 953 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 RAET1EQ8TD07 263 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 ASAP3Q8TDY4 903 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 TMEM143Q96AN5 459 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 DRC1Q96MC2 740 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 IKZF4Q9H2S9 585 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 TUT1Q9H6E5 874 aaKnown RBP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 TMEM134Q9H6X4 195 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 MRPL44Q9H9J2 332 aaKnown RBP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 ERAP1Q9NZ08 941 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PPME1Q9Y570 386 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 TRIM17Q9Y577 477 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PTCH2Q9Y6C5 1203 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 ADGRA3Q8IWK6 1321 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 COL1A2P08123 1366 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 UBE4BO95155 1302 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 K7ENM7 598 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 SLC16A4O15374 487 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 ADAMTS4O75173 837 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 MAFO75444 373 aaPredicted RBP8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 C22orf31O95567 290 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 PGK1P00558 417 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 MAPTP10636 758 aaKnown RBP8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 INSRRP14616 1297 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 GLRA2P23416 452 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 DEKP35659 375 aaKnown RBP8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 ARL2P36404 184 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 NPTX2P47972 431 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 HSP90AA4PQ58FG1 418 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 SARM1Q6SZW1 724 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 LRRC55Q6ZSA7 311 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 IRF2BP1Q8IU81 584 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 ZC3H3Q8IXZ2 948 aaKnown RBP8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 LINC01465Q8N7H1 131 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 PPP1R13LQ8WUF5 828 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 KIFAP3Q92845 792 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 KIFC3Q9BVG8 833 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 AP5M1Q9H0R1 490 aa8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 LARSQ9P2J5 1176 aaKnown RBP8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 ZNF215Q9UL58 517 aaPredicted RBP8.92□□□□□ -0.98
DEPDC4-207ENST00000549249 BICDL2A1A5D9 508 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 TGFB1I1O43294 461 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 INHAP05111 366 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 MYL3P08590 195 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 C6orf222P0C671 652 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 CNGA1P29973 690 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 CPT1AP50416 773 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 CLCN3P51790 818 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 PRMT2P55345 433 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 RTP1P59025 263 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 IGBP1P78318 339 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 PURAQ00577 322 aaKnown RBP8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 FANCCQ00597 558 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 TBC1D8BQ0IIM8 1120 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 DMP1Q13316 513 aaPredicted RBP8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 CAPSQ13938 189 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 FSCN1Q16658 493 aaKnown RBP8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 KNOP1Q1ED39 458 aaKnown RBP8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 ZNF484Q5JVG2 852 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 MARCH8Q5T0T0 291 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 FOXR2Q6PJQ5 311 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 TAS1R3Q7RTX0 852 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 APTXQ7Z2E3 356 aaKnown RBP8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 HAUS6Q7Z4H7 955 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 LRRC71Q8N4P6 559 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 TMEM161BQ8NDZ6 487 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 KLHDC9Q8NEP7 349 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 SLC7A3Q8WY07 619 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 PDLIM2Q96JY6 352 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 ST6GALNAC4Q9H4F1 302 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 C17orf75Q9HAS0 396 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 ARHGAP28Q9P2N2 729 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 TRAF3IP3Q9Y228 551 aa8.91□□□□□ -0.98
DEPDC4-207ENST00000549249 GAS2O43903 313 aaKnown RBP8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 KIF20AO95235 890 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 ADCY5O95622 1261 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 GJB1P08034 283 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 SMIM10L2AP0DMW4 78 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 SMIM10L2BP0DMW5 78 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 RARBP10826 455 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 KLRC1P26715 233 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 CST5P28325 142 aaPredicted RBP8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 GRK4P32298 578 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 NAMPTP43490 491 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 ZNF75DP51815 510 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 TPM4P67936 248 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 ADAM17P78536 824 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 GTF2BQ00403 316 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 LRRC63Q05C16 580 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 PPFIA1Q13136 1202 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 GRIK4Q16099 956 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 TPD52L1Q16890 204 aaPredicted RBP8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 KIAA0753Q2KHM9 967 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 CCSAPQ6IQ19 270 aaPredicted RBP8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 CSGALNACT2Q8N6G5 542 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 LMBR1Q8WVP7 490 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 NLRP7Q8WX94 980 aa8.9□□□□□ -0.98
DEPDC4-207ENST00000549249 KCNN1Q92952 543 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms