RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 ECE1P42892 770 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 GIT2Q14161 759 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 GPATCH4Q5T3I0 446 aaKnown RBP12.44□□□□□ -0.42
DDB1-224ENST00000545894 POTEGQ6S5H5 508 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 POTEEQ6S8J3 1075 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
DDB1-224ENST00000545894 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 OPTNQ96CV9 577 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 HES6Q96HZ4 224 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 GLT8D2Q9H1C3 349 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 SIX2Q9NPC8 291 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 NYAP2Q9P242 653 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 CNOT8Q9UFF9 292 aaKnown RBP12.44□□□□□ -0.42
DDB1-224ENST00000545894 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
DDB1-224ENST00000545894 AFG3L2Q9Y4W6 797 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 OTOFQ9HC10 1997 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 SPDYE5A6NIY4 337 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 F8VZ95 297 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 DDX3XO00571 662 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDB1-224ENST00000545894 CHUKO15111 745 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 AKAP3O75969 853 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 SLC16A2P36021 539 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
DDB1-224ENST00000545894 TCERG1LQ5VWI1 586 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 SFR1Q86XK3 245 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 ERO1BQ86YB8 467 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 RAPGEF5Q92565 580 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 CCDC114Q96M63 670 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 SLC40A1Q9NP59 571 aa12.44□□□□□ -0.42
DDB1-224ENST00000545894 TTC7AQ9ULT0 858 aaPredicted RBP12.44□□□□□ -0.42
DDB1-224ENST00000545894 GREB1LQ9C091 1923 aaPredicted RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 MYH4Q9Y623 1939 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 CYP3A7-CYP3A51PA0A087WV96 503 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 SLC16A3O15427 465 aaKnown RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 GFPT2O94808 682 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 FERP16591 822 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 CYP3A7P24462 503 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 RPL13P26373 211 aaKnown RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 HOXD13P35453 343 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 MAP2K2P36507 400 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 CDR1P51861 262 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 MAGOHP61326 146 aaKnown RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 QPCTQ16769 361 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 KRT71Q3SY84 523 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 SPDYCQ5MJ68 293 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 CATSPER3Q86XQ3 398 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 CACNA2D3Q8IZS8 1091 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 ERMNQ8TAM6 284 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 U2AF1L4Q8WU68 220 aaKnown RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 MKL1Q969V6 931 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 MAGOHBQ96A72 148 aaKnown RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 SEC16BQ96JE7 1060 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 MBOAT7Q96N66 472 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 REEP2Q9BRK0 252 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 WDR18Q9BV38 432 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 CELF4Q9BZC1 486 aaKnown RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 DPH5Q9H2P9 285 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 TYW1Q9NV66 732 aaKnown RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 GCNT4Q9P109 453 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 AJAP1Q9UKB5 411 aaPredicted RBP12.43□□□□□ -0.42
DDB1-224ENST00000545894 AMFRQ9UKV5 643 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 DOCK1Q14185 1865 aa12.43□□□□□ -0.42
DDB1-224ENST00000545894 USP17L15C9J2P7 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 USP17L13C9JLJ4 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 USP17L11C9JVI0 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 USP17L18D6R9N7 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 USP17L22D6RA61 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 USP17L17D6RBQ6 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 USP17L19D6RCP7 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 USP17L20D6RJB6 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 NR3C1P04150 777 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 EIF3BP55884 814 aaKnown RBP12.42□□□□□ -0.42
DDB1-224ENST00000545894 POU5F1Q01860 360 aaKnown RBP12.42□□□□□ -0.42
DDB1-224ENST00000545894 PPARDQ03181 441 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 PPATQ06203 517 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 USP17L24Q0WX57 530 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 SPP2Q13103 211 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.424e-15■■□□□ 12.8
DDB1-224ENST00000545894 USP17L6PQ6QN14 398 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 SYT2Q8N9I0 419 aaPredicted RBP12.42□□□□□ -0.42
DDB1-224ENST00000545894 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 SLC35C1Q96A29 364 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 WNK4Q96J92 1243 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 JPH2Q9BR39 696 aaPredicted RBP12.42□□□□□ -0.42
DDB1-224ENST00000545894 ANO3Q9BYT9 981 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 OSBPL7Q9BZF2 842 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 RAB17Q9H0T7 212 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 CNOT10Q9H9A5 744 aaKnown RBP12.42□□□□□ -0.42
DDB1-224ENST00000545894 DNM3Q9UQ16 869 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 MYH7BA7E2Y1 1941 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 GTPBP10A4D1E9 387 aaKnown RBP12.42□□□□□ -0.42
DDB1-224ENST00000545894 DCDC2CA8MYV0 355 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 IRF6O14896 467 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 PPFIA2O75334 1257 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 FGGP02679 453 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 RDXP35241 583 aaKnown RBP12.42□□□□□ -0.42
DDB1-224ENST00000545894 STAT1P42224 750 aa12.42□□□□□ -0.42
DDB1-224ENST00000545894 ZNF157P51786 506 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms