RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 AIPL1Q9NZN9 384 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 TRPC6Q9Y210 931 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 STAM2O75886 525 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 AGTP01019 485 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 QARSP47897 775 aaKnown RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 EPHA7Q15375 998 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 KRT39Q6A163 491 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 CASC4Q6P4E1 433 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 GJB7Q6PEY0 223 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 CCDC125Q86Z20 511 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 FLAD1Q8NFF5 587 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 GLG1Q92896 1179 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 PNMA5Q96PV4 448 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 MED15Q96RN5 788 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 NUDT12Q9BQG2 462 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 ADAM22Q9P0K1 906 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 NYAP2Q9P242 653 aa8.8□□□□□ -1
PRKAB1-207ENST00000542698 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 RGPD8O14715 1765 aaPredicted RBP8.8□□□□□ -1
PRKAB1-207ENST00000542698 SPATA31A1Q5TZJ5 1347 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.79□□□□□ -1
PRKAB1-207ENST00000542698 LRRD1A4D1F6 860 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 PJA2O43164 708 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 RTN2O75298 545 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 NDUFB10O96000 172 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 CHN1P15882 459 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 FGFR4P22455 802 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 SESN3P58005 492 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 CAV1Q03135 178 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 PRR5LQ6MZQ0 368 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 PPP1R2P3Q6NXS1 205 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 ZNF571Q7Z3V5 609 aaPredicted RBP8.79□□□□□ -1
PRKAB1-207ENST00000542698 HAUS6Q7Z4H7 955 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 JAMLQ86YT9 394 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 SP8Q8IXZ3 490 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 SCYL3Q8IZE3 742 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 C1orf54Q8WWF1 131 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 SLC7A3Q8WY07 619 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 TNFRSF25Q93038 417 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 NOP53Q9NZM5 478 aaKnown RBP8.79□□□□□ -1
PRKAB1-207ENST00000542698 SIK3Q9Y2K2 1263 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 BCL9O00512 1426 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 ATRNO75882 1429 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 CCDC160A6NGH7 325 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 MAPK13O15264 365 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 CYP26A1O43174 497 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 MED24O75448 989 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 LUC7L3O95232 432 aaKnown RBP8.79□□□□□ -1
PRKAB1-207ENST00000542698 INHBAP08476 426 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 TMEM191BP0C7N4 346 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 MYBL2P10244 700 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 TNFAIP1Q13829 316 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 SLC29A2Q14542 456 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 PHLDB3Q6NSJ2 640 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 ACTRT1Q8TDG2 376 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 BCS1LQ9Y276 419 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 PEX19P40855 299 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 CASP4P49662 377 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 RNASELQ05823 741 aaKnown RBP8.79□□□□□ -1
PRKAB1-207ENST00000542698 MTMR1Q13613 665 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 SPARCL1Q14515 664 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 CCDC14Q49A88 953 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 NIM1KQ8IY84 436 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 THOC1Q96FV9 657 aaKnown RBP8.79□□□□□ -1
PRKAB1-207ENST00000542698 NCAPGQ9BPX3 1015 aa8.79□□□□□ -1
PRKAB1-207ENST00000542698 K7ERI5 159 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 AKAP3O75969 853 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 APBA3O96018 575 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 KRT1P04264 644 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 FAM153BP0C7A2 387 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 MSH2P43246 934 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 YWHAGP61981 247 aaKnown RBP eCLIP8.78□□□□□ -1
PRKAB1-207ENST00000542698 FAM153CQ494X1 144 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 MIIPQ5JXC2 388 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 CDC42EP5Q6NZY7 148 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 DNAJC24Q6P3W2 148 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 SCYL2Q6P3W7 929 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 ZNF449Q6P9G9 518 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 CENPUQ71F23 418 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 EPM2AIP1Q7L775 607 aaPredicted RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 TSEN2Q8NCE0 465 aaKnown RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 MDM1Q8TC05 714 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 UPF1Q92900 1129 aaKnown RBP eCLIP8.78□□□□□ -15e-12■■■■■ 33.6
PRKAB1-207ENST00000542698 ATP2A3Q93084 1043 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 RTFDC1Q9BY42 306 aaPredicted RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 EHD4Q9H223 541 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 TMBIM4Q9HC24 238 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 SAYSD1Q9NPB0 183 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 FAM153AQ9UHL3 310 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 WDR91A4D1P6 747 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 CFAP73A6NFT4 308 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 EPHB6O15197 1021 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 PHF2O75151 1096 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 RPS6KA5O75582 802 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 SCP2P22307 547 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 RXRBP28702 533 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 KCNJ1P48048 391 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 SNX16P57768 344 aa8.78□□□□□ -1
PRKAB1-207ENST00000542698 SDCCAG8Q86SQ7 713 aaPredicted RBP8.78□□□□□ -1
PRKAB1-207ENST00000542698 NKX2-3Q8TAU0 364 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms