RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 PIK3AP1Q6ZUJ8 805 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 ZNF579Q8NAF0 562 aaKnown RBP15.82■□□□□ 0.12
SNHG1-213ENST00000540725 OXER1Q8TDS5 423 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 SLC7A3Q8WY07 619 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 CASP10Q92851 521 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 CEP170P1Q96L14 293 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 FBXL18Q96ME1 805 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 IFT122Q9HBG6 1241 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 WRAP73Q9P2S5 460 aaPredicted RBP15.82■□□□□ 0.12
SNHG1-213ENST00000540725 TPCN1Q9ULQ1 816 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 COL4A3BPQ9Y5P4 624 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 HCFC2Q9Y5Z7 792 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 MEIS3P2A8K0S8 358 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 TBX3O15119 743 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 ZNF623O75123 536 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 CA8P35219 290 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 POLGP54098 1239 aaPredicted RBP15.81■□□□□ 0.12
SNHG1-213ENST00000540725 BMS1Q14692 1282 aaKnown RBP15.81■□□□□ 0.12
SNHG1-213ENST00000540725 TPRNQ4KMQ1 711 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 NOMO2Q5JPE7 1267 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 BMP8AQ7Z5Y6 402 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 TMEM173Q86WV6 379 aaPredicted RBP15.81■□□□□ 0.12
SNHG1-213ENST00000540725 HAS1Q92839 578 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
SNHG1-213ENST00000540725 LXNQ9BS40 222 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 DHX33Q9H6R0 707 aaKnown RBP15.81■□□□□ 0.12
SNHG1-213ENST00000540725 AGPAT5Q9NUQ2 364 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 TBC1D13Q9NVG8 400 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 INPP5FQ9Y2H2 1132 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 PPME1Q9Y570 386 aa15.81■□□□□ 0.12
SNHG1-213ENST00000540725 TDRD15B5MCY1 1934 aaKnown RBP15.8■□□□□ 0.12
SNHG1-213ENST00000540725 CARNS1A5YM72 827 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 MARCH6O60337 910 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 CLASP2O75122 1294 aaKnown RBP15.8■□□□□ 0.12
SNHG1-213ENST00000540725 CTDNEP1O95476 244 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 RFC5P40937 340 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 NHLH1Q02575 133 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 RNASELQ05823 741 aaKnown RBP15.8■□□□□ 0.12
SNHG1-213ENST00000540725 EPHA7Q15375 998 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 EARS2Q5JPH6 523 aaKnown RBP15.8■□□□□ 0.12
SNHG1-213ENST00000540725 NCAPH2Q6IBW4 605 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 C4orf19Q8IY42 314 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 EXOC8Q8IYI6 725 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 VPS52Q8N1B4 723 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 PRPF31Q8WWY3 499 aaKnown RBP15.8■□□□□ 0.12
SNHG1-213ENST00000540725 PSPC1Q8WXF1 523 aaKnown RBP15.8■□□□□ 0.12
SNHG1-213ENST00000540725 TMEM143Q96AN5 459 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 PBXIP1Q96AQ6 731 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 ZBP1Q9H171 429 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 NRDE2Q9H7Z3 1164 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 BMP2KQ9NSY1 1161 aaPredicted RBP15.8■□□□□ 0.12
SNHG1-213ENST00000540725 ORC3Q9UBD5 711 aaPredicted RBP15.8■□□□□ 0.12
SNHG1-213ENST00000540725 CDH22Q9UJ99 828 aa15.8■□□□□ 0.12
SNHG1-213ENST00000540725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.79■□□□□ 0.12
SNHG1-213ENST00000540725 FAM205CA6NFA0 338 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 OFD1O75665 1012 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 CXCL14O95715 111 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 SP100P23497 879 aaPredicted RBP15.79■□□□□ 0.12
SNHG1-213ENST00000540725 SRGAP1Q7Z6B7 1085 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 ALYREFQ86V81 257 aaKnown RBP15.79■□□□□ 0.12
SNHG1-213ENST00000540725 BCL7CQ8WUZ0 217 aaPredicted RBP15.79■□□□□ 0.12
SNHG1-213ENST00000540725 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 WASF1Q92558 559 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 PGBD4Q96DM1 585 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 IGSF21Q96ID5 467 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 GBP3Q9H0R5 595 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 MINDY3Q9H8M7 445 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 RGL1Q9NZL6 768 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 PCDHB2Q9Y5E7 798 aa15.79■□□□□ 0.12
SNHG1-213ENST00000540725 DENND4AQ7Z401 1863 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 GAS2O43903 313 aaKnown RBP15.78■□□□□ 0.12
SNHG1-213ENST00000540725 GALTP07902 379 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 SRGAP2CP0DJJ0 459 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
SNHG1-213ENST00000540725 AK2P54819 239 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 ANAPC15P60006 121 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 ITIH3Q06033 890 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 SPIRE1Q08AE8 756 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 SIGLEC14Q08ET2 396 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 LAMTOR4Q0VGL1 99 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 NR5A1Q13285 461 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 EMC2Q15006 297 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 ANKRD1Q15327 319 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 PTPN21Q16825 1174 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 CES5AQ6NT32 575 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 AGMOQ6ZNB7 445 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 OTUD6AQ7L8S5 288 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 DDX53Q86TM3 631 aaKnown RBP15.78■□□□□ 0.12
SNHG1-213ENST00000540725 SLFN12Q8IYM2 578 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 DYDC2Q96IM9 177 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 ADAM7Q9H2U9 754 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 DNAJB4Q9UDY4 337 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 IRAK3Q9Y616 596 aa15.78■□□□□ 0.12
SNHG1-213ENST00000540725 C2orf16Q68DN1 1984 aa15.77■□□□□ 0.12
SNHG1-213ENST00000540725 B4GALT3O60512 393 aa15.77■□□□□ 0.12
SNHG1-213ENST00000540725 BAG4O95429 457 aaKnown RBP15.77■□□□□ 0.12
SNHG1-213ENST00000540725 CTSAP10619 480 aa15.77■□□□□ 0.12
SNHG1-213ENST00000540725 KRT2P35908 639 aa15.77■□□□□ 0.12
SNHG1-213ENST00000540725 SLC11A1P49279 550 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms