RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PI15O43692 258 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 B4GALT3O60512 393 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 GALTP07902 379 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 SFNP31947 248 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 SLC11A1P49279 550 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 TDGQ13569 410 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 TARBP2Q15633 366 aaKnown RBP15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 OTOP3Q7RTS5 596 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 GPR149Q86SP6 731 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 RHPN2Q8IUC4 686 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 SIX5Q8N196 739 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 NLRP4Q96MN2 994 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 RIT2Q99578 217 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 FAM105AQ9NUU6 356 aa15.76■□□□□ 0.11
SMARCA4-206ENST00000538456 EP300Q09472 2414 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 SKIP12755 728 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 NPR3P17342 541 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 AOC1P19801 751 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 KLRC2P26717 231 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 DNM2P50570 870 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 CATSPER4Q7RTX7 472 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 MIER3Q7Z3K6 550 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 PPFIBP1Q86W92 1011 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 ZNF280BQ86YH2 543 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 KSR1Q8IVT5 923 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 BICD2Q8TD16 824 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 SLC5A5Q92911 643 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 TRAIPQ9BWF2 469 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 EMILIN2Q9BXX0 1053 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 KCNK12Q9HB15 430 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 VPS54Q9P1Q0 977 aa15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 SUCLA2Q9P2R7 463 aaPredicted RBP15.75■□□□□ 0.11
SMARCA4-206ENST00000538456 DMXL1Q9Y485 3027 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 PRPF3O43395 683 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 EDIL3O43854 480 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 OFD1O75665 1012 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 CNPP09543 421 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 ID4P47928 161 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 RAB27AP51159 221 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 CLCN4P51793 760 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 AKAP17AQ02040 695 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 KRT32Q14532 448 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 ANGPT1Q15389 498 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 XKR3Q5GH77 459 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 ZNF410Q86VK4 478 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 CCDC105Q8IYK2 499 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 CCDC148Q8NFR7 591 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 URGCPQ8TCY9 931 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 RSPH1Q8WYR4 309 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 BRF1Q92994 677 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 KLHL5Q96PQ7 755 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 DUSP12Q9UNI6 340 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 ZNF292O60281 2723 aa15.74■□□□□ 0.11
SMARCA4-206ENST00000538456 CARNS1A5YM72 827 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 STK25O00506 426 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 C2CD2LO14523 706 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 NARSO43776 548 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 HMGB1P09429 215 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 MYBP10242 640 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 CDC42EP1Q00587 391 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 LETM2Q2VYF4 491 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 TSGA10IPQ3SY00 556 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 Q6ZUG5 572 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 SKAP1Q86WV1 359 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 DTWD2Q8NBA8 298 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 CEP89Q96ST8 783 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 SLC26A6Q9BXS9 759 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 NIFKQ9BYG3 293 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 INO80BQ9C086 356 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 PCDHB2Q9Y5E7 798 aa15.73■□□□□ 0.11
SMARCA4-206ENST00000538456 CACNA1AO00555 2505 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 IGKV6-21A0A0C4DH24 114 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 DDX11L8A8MPP1 907 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 PSMD10O75832 226 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 DDHD2O94830 711 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 STBD1O95210 358 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 TDP2O95551 362 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 CFHP08603 1231 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 RFX1P22670 979 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 AFF1P51825 1210 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 PLA2G4FQ68DD2 849 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 TBCKQ8TEA7 893 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 RSAD2Q8WXG1 361 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 PGBD4Q96DM1 585 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 FAM193BQ96PV7 902 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 RTP3Q9BQQ7 232 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 MAN1C1Q9NR34 630 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 MRPL17Q9NRX2 175 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 NID2Q14112 1375 aa15.72■□□□□ 0.11
SMARCA4-206ENST00000538456 DOCK8Q8NF50 2099 aa15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 N4BP1O75113 896 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 ZNF623O75123 536 aa15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 MAFO75444 373 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 POMCP01189 267 aa15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 GBP2P32456 591 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 USP11P51784 963 aa15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 AK2P54819 239 aa15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 NLRP5P59047 1200 aa15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 AGMOQ6ZNB7 445 aa15.71■□□□□ 0.11
SMARCA4-206ENST00000538456 C15orf39Q6ZRI6 1047 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms