RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 NLGN2Q8NFZ4 835 aa12.55□□□□□ -0.4
USP35-207ENST00000530546 ALS2CR12Q96Q35 445 aa12.55□□□□□ -0.4
USP35-207ENST00000530546 PDCD2LQ9BRP1 358 aa12.55□□□□□ -0.4
USP35-207ENST00000530546 GPRC5CQ9NQ84 441 aa12.55□□□□□ -0.4
USP35-207ENST00000530546 FZD9O00144 591 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
USP35-207ENST00000530546 EXOC3O60645 756 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 ZMYND10O75800 440 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 NEBLO76041 1014 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 MATR3P43243 847 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP35-207ENST00000530546 ZNF131P52739 623 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 NPEPPSP55786 919 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 PTK2Q05397 1052 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
USP35-207ENST00000530546 SGSM3Q96HU1 749 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 PXMP2Q9NR77 195 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 EHD2Q9NZN4 543 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 SEL1LQ9UBV2 794 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 FRMD4BQ9Y2L6 1034 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 ANO9A1A5B4 782 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 SRRM3A6NNA2 597 aaPredicted RBP12.54□□□□□ -0.4
USP35-207ENST00000530546 RARRES1P49788 294 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
USP35-207ENST00000530546 KIAA0753Q2KHM9 967 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 RBM46Q8TBY0 533 aaKnown RBP12.54□□□□□ -0.4
USP35-207ENST00000530546 NEK9Q8TD19 979 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 GGA3Q9NZ52 723 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 SNX12Q9UMY4 172 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 MUTP22033 750 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 KLRC1P26715 233 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 YWHABP31946 246 aaKnown RBP12.54□□□□□ -0.4
USP35-207ENST00000530546 ZKSCAN8Q15776 578 aaPredicted RBP12.54□□□□□ -0.4
USP35-207ENST00000530546 SLC18A3Q16572 532 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 ZNF571Q7Z3V5 609 aaPredicted RBP12.54□□□□□ -0.4
USP35-207ENST00000530546 NOX5Q96PH1 765 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 AS3MTQ9HBK9 375 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 AIPL1Q9NZN9 384 aa12.54□□□□□ -0.4
USP35-207ENST00000530546 BACH1O14867 736 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 CCNE2O96020 404 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 EZRP15311 586 aaKnown RBP12.53□□□□□ -0.4
USP35-207ENST00000530546 PTPROQ16827 1216 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 XKR9Q5GH70 373 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 DPY19L2P1Q6NXN4 242 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 EPN3Q9H201 632 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
USP35-207ENST00000530546 SIX2Q9NPC8 291 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 PLCB1Q9NQ66 1216 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 ATAD5Q96QE3 1844 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 PJA2O43164 708 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 GFPT2O94808 682 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 FTCDO95954 541 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 SNCBQ16143 134 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 FAM102BQ5T8I3 360 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 NIPA1Q7RTP0 329 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 IRF2BP2Q7Z5L9 587 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 BORCS6Q96GS4 357 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
USP35-207ENST00000530546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.53□□□□□ -0.4
USP35-207ENST00000530546 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 KCND2Q9NZV8 630 aa12.53□□□□□ -0.4
USP35-207ENST00000530546 LARSQ9P2J5 1176 aaKnown RBP12.53□□□□□ -0.4
USP35-207ENST00000530546 PEX10O60683 326 aa12.52□□□□□ -0.4
USP35-207ENST00000530546 PALMO75781 387 aa12.52□□□□□ -0.4
USP35-207ENST00000530546 MYBL2P10244 700 aa12.52□□□□□ -0.4
USP35-207ENST00000530546 PEX3P56589 373 aa12.52□□□□□ -0.4
USP35-207ENST00000530546 CCDC13Q8IYE1 715 aa12.52□□□□□ -0.4
USP35-207ENST00000530546 GDAP1L1Q96MZ0 367 aa12.52□□□□□ -0.4
USP35-207ENST00000530546 PACSIN2Q9UNF0 486 aaPredicted RBP12.52□□□□□ -0.4
USP35-207ENST00000530546 TELO2Q9Y4R8 837 aa12.52□□□□□ -0.4
USP35-207ENST00000530546 FER1L6Q2WGJ9 1857 aa12.52□□□□□ -0.4
USP35-207ENST00000530546 SOCS7O14512 581 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 SLC16A4O15374 487 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 RTN2O75298 545 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 NR3C2P08235 984 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 PAX7P23759 505 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 FMO5P49326 533 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 SARNPP82979 210 aaKnown RBP12.52□□□□□ -0.41
USP35-207ENST00000530546 NAA35Q5VZE5 725 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 NLRX1Q86UT6 975 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 OSBPL9Q96SU4 736 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 GINM1Q9NU53 330 aa12.52□□□□□ -0.41
USP35-207ENST00000530546 KLHL33A6NCF5 533 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 RBAK-RBAKDNI3L0D1 243 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 CLSTN1O94985 981 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 SLC8A1P32418 973 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 SOX10P56693 466 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 SLC8A3P57103 927 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 CCDC181Q5TID7 509 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 EMBQ6PCB8 327 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 KDM7AQ6ZMT4 941 aa12.51□□□□□ -0.41
USP35-207ENST00000530546 CREG2Q8IUH2 290 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms