RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 KRT4P19013 534 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 DSG1Q02413 1049 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 Q6ZPA2 131 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 ZNF662Q6ZS27 426 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 KIF18BQ86Y91 864 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 ZZZ3Q8IYH5 903 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 MB21D1Q8N884 522 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 CHTF18Q8WVB6 975 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 ATXN2LQ8WWM7 1075 aaKnown RBP6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 PGBD4Q96DM1 585 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 RNPC3Q96LT9 517 aaKnown RBP6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 NOL10Q9BSC4 688 aaKnown RBP6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 MTFR1LQ9H019 292 aa6.18□□□□□ -1.42
CTHRC1-204ENST00000520880 MTSS1O43312 755 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 TGM5O43548 720 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 GAS7O60861 476 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 FAM20BO75063 409 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 RPS6KA4O75676 772 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 GAAP10253 952 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 NEK4P51957 841 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 SMAD3P84022 425 aaKnown RBP6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 SPIDRQ14159 915 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 TKFCQ3LXA3 575 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 MFSD5Q6N075 450 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 HTR3DQ70Z44 454 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 SYNPOQ8N3V7 929 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 EFHBQ8N7U6 833 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 MDGA1Q8NFP4 955 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 PPP1R14CQ8TAE6 165 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 ARL8AQ96BM9 186 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 MNTQ99583 582 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 IFT57Q9NWB7 429 aa6.17□□□□□ -1.42
CTHRC1-204ENST00000520880 MAFGO15525 162 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 PCDH8O95206 1070 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 POU3F2P20265 443 aaPredicted RBP6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 NPEPPSP55786 919 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 INHBEP58166 350 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 PURAQ00577 322 aaKnown RBP6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 TCEA2Q15560 299 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 SMN1Q16637 294 aaKnown RBP6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 PCSK4Q6UW60 755 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 LRRTM3Q86VH5 581 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 PIK3C3Q8NEB9 887 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 ZNF496Q96IT1 587 aaPredicted RBP6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 HIST1H2AHQ96KK5 128 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 UIMC1Q96RL1 719 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 HIST1H2AJQ99878 128 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 THG1LQ9NWX6 298 aaKnown RBP6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 ING3Q9NXR8 418 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 MYPNQ86TC9 1320 aa6.16□□□□□ -1.42
CTHRC1-204ENST00000520880 MFAP3LO75121 409 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 IPO13O94829 963 aaKnown RBP6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 FSBPO95073 299 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 CFBP00751 764 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 CD40P25942 277 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 LRRC32Q14392 662 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 MAN2A1Q16706 1144 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 FAM214AQ32MH5 1076 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 RABL3Q5HYI8 236 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 ZBTB41Q5SVQ8 909 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 MRGPRGQ86SM5 289 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 ULK2Q8IYT8 1036 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 UBXN4Q92575 508 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 DRC1Q96MC2 740 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 NRDE2Q9H7Z3 1164 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 TRPS1Q9UHF7 1281 aa6.15□□□□□ -1.42
CTHRC1-204ENST00000520880 LCHNA4D1U4 455 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 GRXCR1A8MXD5 290 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 GOLGA6L6A8MZA4 724 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 CD69Q07108 199 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 PCBP1Q15365 356 aaKnown RBP eCLIP6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 CNNM4Q6P4Q7 775 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 HOMER1Q86YM7 354 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 ST8SIA2Q92186 375 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 AGAP2Q99490 1192 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 ENKD1Q9H0I2 346 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 MS4A5Q9H3V2 200 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 MSRAQ9UJ68 235 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 PCDHB6Q9Y5E3 794 aa6.14□□□□□ -1.43
CTHRC1-204ENST00000520880 ALDH1A2O94788 518 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 GNAT2P19087 354 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 HK1P19367 917 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 NR4A1P22736 598 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 NAIF1Q69YI7 327 aaPredicted RBP6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 ESPNLQ6ZVH7 1005 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 C16orf86Q6ZW13 317 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 MRGPREQ86SM8 312 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 RPUSD2Q8IZ73 545 aaKnown RBP6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 UNC5BQ8IZJ1 945 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 ZNF276Q8N554 614 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 CDYL2Q8N8U2 506 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 SMC1BQ8NDV3 1235 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 SLC25A43Q8WUT9 341 aaPredicted RBP6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 NINJ1Q92982 152 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 PRRX2Q99811 253 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 FDXACB1Q9BRP7 624 aaPredicted RBP6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 TTPALQ9BTX7 342 aa6.13□□□□□ -1.43
CTHRC1-204ENST00000520880 FANCLQ9NW38 375 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms