RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TESPA1A2RU30 521 aaPredicted RBP19.92■□□□□ 0.78
SDC2-202ENST00000518385 VGLL3A8MV65 326 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 EIF2AK2P19525 551 aaKnown RBP19.92■□□□□ 0.78
SDC2-202ENST00000518385 ANXA13P27216 316 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 COPB2P35606 906 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 CACNB1Q02641 598 aaPredicted RBP19.92■□□□□ 0.78
SDC2-202ENST00000518385 ADAM9Q13443 819 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 DRP2Q13474 957 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 RGMBQ6NW40 437 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 FRMD5Q7Z6J6 570 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 BCAS4Q8TDM0 211 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 PIGOQ8TEQ8 1089 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 SENP7Q9BQF6 1050 aa19.92■□□□□ 0.78
SDC2-202ENST00000518385 TYW1Q9NV66 732 aaKnown RBP19.92■□□□□ 0.78
SDC2-202ENST00000518385 ARHGEF35A5YM69 484 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 BTNL10A8MVZ5 291 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 MYBL2P10244 700 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 CYP2C8P10632 490 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 MAPTP10636 758 aaKnown RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 QARSP47897 775 aaKnown RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 GNGT1P63211 74 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 Q3C1V9 767 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 PDXDC1Q6P996 788 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 LRIG3Q6UXM1 1119 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 TRIM59Q8IWR1 403 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 PTPN18Q99952 460 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 LRRC1Q9BTT6 524 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 METTL14Q9HCE5 456 aaKnown RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 GEMIN8Q9NWZ8 242 aaKnown RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 ARHGAP20Q9P2F6 1191 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 TLL2Q9Y6L7 1015 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 GRIN2DO15399 1336 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 HMGB1P1B2RPK0 211 aaPredicted RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 SLC16A3O15427 465 aaKnown RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 KIAA0754O94854 1291 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 EIF4A3P38919 411 aaKnown RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 ITGB3BPQ13352 177 aaPredicted RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 ALCAMQ13740 583 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 PLCB4Q15147 1175 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 ASTE1Q2TB18 679 aaPredicted RBP19.91■□□□□ 0.78
SDC2-202ENST00000518385 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.91■□□□□ 0.78
SDC2-202ENST00000518385 NCAPG2Q86XI2 1143 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 NELFCDQ8IXH7 590 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 FGFBP2Q9BYJ0 223 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 CEP72Q9P209 647 aa19.91■□□□□ 0.78
SDC2-202ENST00000518385 WDR64B1ANS9 1081 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 ZNF263O14978 683 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 ZNF185O15231 689 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 DKC1O60832 514 aaKnown RBP eCLIP19.9■□□□□ 0.78
SDC2-202ENST00000518385 NR3C2P08235 984 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 MYCLP12524 364 aaPredicted RBP19.9■□□□□ 0.78
SDC2-202ENST00000518385 CCT5P48643 541 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 IFI16Q16666 785 aaKnown RBP19.9■□□□□ 0.78
SDC2-202ENST00000518385 SLC9C1Q4G0N8 1177 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 CFAP58Q5T655 872 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 ZNF746Q6NUN9 644 aaPredicted RBP19.9■□□□□ 0.78
SDC2-202ENST00000518385 C4orf19Q8IY42 314 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 MYCT1Q8N699 235 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 INPP4AQ96PE3 977 aaPredicted RBP19.9■□□□□ 0.78
SDC2-202ENST00000518385 IWS1Q96ST2 819 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 RNF216Q9NWF9 866 aaPredicted RBP19.9■□□□□ 0.78
SDC2-202ENST00000518385 PCDHB13Q9Y5F0 798 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 PFASO15067 1338 aa19.9■□□□□ 0.78
SDC2-202ENST00000518385 MANSC4A6NHS7 340 aaPredicted RBP19.89■□□□□ 0.77
SDC2-202ENST00000518385 SERPING1P05155 500 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 ERCC3P19447 782 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 ERVK-9P63128 1117 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 TNNC1P63316 161 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 ANKRD35Q8N283 1001 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 MICALL1Q8N3F8 863 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 SLC17A8Q8NDX2 589 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 EEF2KMTQ96G04 330 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 ANKEF1Q9NU02 776 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.89■□□□□ 0.77
SDC2-202ENST00000518385 CAPN6Q9Y6Q1 641 aa19.89■□□□□ 0.77
SDC2-202ENST00000518385 TOMM70O94826 608 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 FSBPO95073 299 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 GCNT3O95395 438 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 SLC10A3P09131 477 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 NR2F2P24468 414 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 GCLCP48506 637 aaPredicted RBP19.88■□□□□ 0.77
SDC2-202ENST00000518385 PSMC5P62195 406 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 CYP27A1Q02318 531 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 CCDC91Q7Z6B0 441 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 IQCKQ8N0W5 287 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 CNPY4Q8N129 248 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 SHCBP1Q8NEM2 672 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 DNERQ8NFT8 737 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 SMCR8Q8TEV9 937 aaPredicted RBP19.88■□□□□ 0.77
SDC2-202ENST00000518385 BAP1Q92560 729 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 DMGDHQ9UI17 866 aaKnown RBP19.88■□□□□ 0.77
SDC2-202ENST00000518385 NFASCO94856 1347 aa19.88■□□□□ 0.77
SDC2-202ENST00000518385 RSPH10B2B2RC85 870 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 TULP1O00294 542 aaPredicted RBP19.87■□□□□ 0.77
SDC2-202ENST00000518385 MOCS3O95396 460 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 RSPH10BP0C881 870 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 CASP5P51878 434 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 MYBPC2Q14324 1141 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 ZNF720Q7Z2F6 126 aa19.87■□□□□ 0.77
SDC2-202ENST00000518385 TAX1BP1Q86VP1 789 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms