RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 NDE1Q9NXR1 346 aa13.09□□□□□ -0.31
PCDHGA6-201ENST00000517434 LMCD1Q9NZU5 365 aa13.09□□□□□ -0.31
PCDHGA6-201ENST00000517434 MYO1FO00160 1098 aa13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 MOCS3O95396 460 aa13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 MXI1P50539 228 aa13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 NOP14P78316 857 aaKnown RBP13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 SBK1Q52WX2 424 aa13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 CCDC124Q96CT7 223 aaKnown RBP13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 TRIM55Q9BYV6 548 aa13.08□□□□□ -0.31
PCDHGA6-201ENST00000517434 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 AP2B1P63010 937 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 BFSP1Q12934 665 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 ARL13BQ3SXY8 428 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 CHST13Q8NET6 341 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 LRRC37BQ96QE4 947 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 EIF4E1BA6NMX2 242 aaKnown RBP13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 ATP1A3P13637 1013 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 USP11P51784 963 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAGOHP61326 146 aaKnown RBP13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 CYP4F22Q6NT55 531 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 LINC00301Q8NCQ3 95 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 GPRC5AQ8NFJ5 357 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 P2RX5Q93086 422 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 TRIM62Q9BVG3 475 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 EPN3Q9H201 632 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 TSC22D4Q9Y3Q8 395 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 NTSR2O95665 410 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 MT-ND3P03897 115 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 CSF1RP07333 972 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 ARL4AP40617 200 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 CCDC144BQ3MJ40 725 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 ACBD5Q5T8D3 534 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 CDKL2Q92772 493 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 SPATA33Q96N06 139 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 TRIM56Q9BRZ2 755 aaKnown RBP13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 SLITRK6Q9H5Y7 841 aa13.08□□□□□ -0.32
PCDHGA6-201ENST00000517434 A0A087WWV3 80 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 TARSL2A2RTX5 802 aaKnown RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 USP27XA6NNY8 438 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 DNAJC6O75061 913 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 FTCDO95954 541 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 ACTN1P12814 892 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 CCND1P24385 295 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 PSMC5P62195 406 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 FOXO4P98177 505 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 CDR2Q01850 454 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 ITKQ08881 620 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAN2A1Q16706 1144 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 UBE2SQ16763 222 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 C10orf76Q5T2E6 689 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 ANAPC5Q9UJX4 755 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 GARSP41250 739 aaKnown RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 EFNA5P52803 228 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 ARPP19P56211 112 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 CYLC2Q14093 348 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 DEFB132Q7Z7B7 95 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 UPF3AQ9H1J1 476 aaKnown RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 EPC1Q9H2F5 836 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 PRDM4Q9UKN5 801 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 ORC6Q9Y5N6 252 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 ESYT2A0FGR8 921 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 CLDN3O15551 220 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 LRRC63Q05C16 580 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 C12orf60Q5U649 245 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 PGBD4Q96DM1 585 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 KIFC3Q9BVG8 833 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 SLC38A10Q9HBR0 1119 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAN1B1Q9UKM7 699 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 PTPN22Q9Y2R2 807 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 SRPRBQ9Y5M8 271 aaKnown RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 EXOC1LA0A1B0GW35 172 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 PSMD14O00487 310 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 HUS1O60921 280 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 MARK3P27448 753 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 VEPH1Q14D04 833 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 PTPN21Q16825 1174 aa13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 SAMSN1Q9NSI8 373 aaKnown RBP13.07□□□□□ -0.32
PCDHGA6-201ENST00000517434 PPLO60437 1756 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 MAGEB2O15479 319 aa13.06□□□□□ -0.32
PCDHGA6-201ENST00000517434 HAUS5O94927 633 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms