RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PCDH12Q9NPG4 1184 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 CATSPERZQ9NTU4 200 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 ATP23Q9Y6H3 246 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 hCG_2014768A0A024R1R8 64 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 KLRG2A4D1S0 409 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 CLASP2O75122 1294 aaKnown RBP3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 GLRX3O76003 335 aaKnown RBP3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 NPTXRO95502 500 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 ABHD16AO95870 558 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 ADCY8P40145 1251 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 IGBP1P78318 339 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 CD83Q01151 205 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 MAP3K12Q12852 859 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 MOGSQ13724 837 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 SAFB2Q14151 953 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 CRY1Q16526 586 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 GAGE13Q4V321 117 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 OLFML1Q6UWY5 402 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 DDX46Q7L014 1031 aaKnown RBP3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 OSTM1Q86WC4 334 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 CISD2Q8N5K1 135 aaKnown RBP3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 TMEM176AQ96HP8 235 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 C16orf92Q96LL3 132 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 GPR87Q9BY21 358 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 FAM126AQ9BYI3 521 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 CD244Q9BZW8 370 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 BRINP2Q9C0B6 783 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 RIC8BQ9NVN3 520 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 CDC42EP3Q9UKI2 254 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 CBLCQ9ULV8 474 aa3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 NOP58Q9Y2X3 529 aaKnown RBP3.41□□□□□ -1.86
HMGB1P35-201ENST00000503360 GRXCR1A8MXD5 290 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 CBX4O00257 560 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 C4BPAP04003 597 aaKnown RBP3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 ZNF37AP17032 561 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 KRT15P19012 456 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 CTGFP29279 349 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 SCNN1BP51168 640 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 JAM2P57087 298 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 ANAPC15P60006 121 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 STRN3Q13033 797 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 SEPT7Q16181 437 aaKnown RBP3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 TMEM177Q53S58 311 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 ZNF362Q5T0B9 420 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 KLHDC10Q6PID8 442 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 FAM111BQ6SJ93 734 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 ARHGAP36Q6ZRI8 547 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 OVCH1Q7RTY7 1134 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 STRA8Q7Z7C7 330 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 ANKRD13AQ8IZ07 590 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 NXPE1Q8N323 547 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 C2orf69Q8N8R5 385 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 GFM2Q969S9 779 aaKnown RBP3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 SLC7A6OSQ96CW6 309 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 MNTQ99583 582 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 CABP5Q9NP86 173 aa3.4□□□□□ -1.87
HMGB1P35-201ENST00000503360 COL11A2P13942 1736 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 ZNF891A8MT65 544 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 MAN2B1O00754 1011 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 KCNK3O14649 394 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 H2AFYO75367 372 aaKnown RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 RPS6KA4O75676 772 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 IPO13O94829 963 aaKnown RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 AMY2AP04746 511 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 AMY2BP19961 511 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 POU3F3P20264 500 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 LACTBP83111 547 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 SART3Q15020 963 aaKnown RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 ELAVL1Q15717 326 aaKnown RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 DCAF17Q5H9S7 520 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 METTL24Q5JXM2 366 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 EPHA10Q5JZY3 1008 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 HECTD2Q5U5R9 776 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 EP400NLQ6ZTU2 488 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 DDX42Q86XP3 938 aaKnown RBP eCLIP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 PTRH1Q86Y79 214 aaKnown RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 KIF18BQ86Y91 864 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 VRK3Q8IV63 474 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 BCL6BQ8N143 479 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 AFAP1L2Q8N4X5 818 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 CHST14Q8NCH0 376 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 OR2W6PQ8NHA6 318 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 ATL2Q8NHH9 583 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 PROKR1Q8TCW9 393 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 ORAI3Q9BRQ5 295 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 SMURF1Q9HCE7 757 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 B4GALT6Q9UBX8 382 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 ZKSCAN5Q9Y2L8 839 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 ATP8A1Q9Y2Q0 1164 aa3.39□□□□□ -1.87
HMGB1P35-201ENST00000503360 SLC12A8A0AV02 714 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 PTPDC1A2A3K4 754 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 ZNF561-AS1K7EIQ3 104 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 GAS7O60861 476 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 MFAP3LO75121 409 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 KRT37O76014 449 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 F2P00734 622 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 CPEP16870 476 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 CDK11BP21127 795 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms