RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 PARD6BQ9BYG5 372 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 ATP6V0A4Q9HBG4 840 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 ZFYVE28Q9HCC9 887 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 RAB21Q9UL25 225 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 EIF4A3P38919 411 aaKnown RBP23.11■■□□□ 1.29
FGFR1-223ENST00000496296 SMTNP53814 917 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 KIF5AQ12840 1032 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 DEFB115Q30KQ5 88 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 ZC2HC1CQ53FD0 456 aaPredicted RBP23.11■■□□□ 1.29
FGFR1-223ENST00000496296 HGSNATQ68CP4 663 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 HHIPL1Q96JK4 782 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 C17orf75Q9HAS0 396 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.11■■□□□ 1.29
FGFR1-223ENST00000496296 PCDHA13Q9Y5I0 950 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 CCDC151A5D8V7 595 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 FAM155AB1AL88 458 aaPredicted RBP23.11■■□□□ 1.29
FGFR1-223ENST00000496296 TLR2O60603 784 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 TUBBP07437 444 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 DMTNQ08495 405 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 MTERF2Q49AM1 385 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 HS2ST1Q7LGA3 356 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 TXLNBQ8N3L3 684 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 MAML3Q96JK9 1138 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 FAM167AQ96KS9 214 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 GPR20Q99678 358 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 TMEM206Q9H813 350 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 PDGFCQ9NRA1 345 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 PLXNA1Q9UIW2 1896 aa23.11■■□□□ 1.29
FGFR1-223ENST00000496296 CTAGE15A4D2H0 777 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 PLEKP08567 350 aaPredicted RBP23.1■■□□□ 1.29
FGFR1-223ENST00000496296 CTAGE8P0CG41 777 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 PNMA6AP0CW24 399 aaPredicted RBP23.1■■□□□ 1.29
FGFR1-223ENST00000496296 DMP1Q13316 513 aaPredicted RBP23.1■■□□□ 1.29
FGFR1-223ENST00000496296 CC2D1AQ6P1N0 951 aaPredicted RBP23.1■■□□□ 1.29
FGFR1-223ENST00000496296 CACNA2D4Q7Z3S7 1137 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 CTAGE6Q86UF2 777 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 CTAGE4Q8IX94 777 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 SYCP3Q8IZU3 236 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 GOLGA5Q8TBA6 731 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 HNRNPLLQ8WVV9 542 aaKnown RBP23.1■■□□□ 1.29
FGFR1-223ENST00000496296 NIFKQ9BYG3 293 aaKnown RBP23.1■■□□□ 1.29
FGFR1-223ENST00000496296 METTL14Q9HCE5 456 aaKnown RBP23.1■■□□□ 1.29
FGFR1-223ENST00000496296 PLCB1Q9NQ66 1216 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 KCNG1Q9UIX4 513 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 WDR81Q562E7 1941 aa23.1■■□□□ 1.29
FGFR1-223ENST00000496296 ATP4AP20648 1035 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 POLGP54098 1239 aaPredicted RBP23.09■■□□□ 1.29
FGFR1-223ENST00000496296 PEX3P56589 373 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 DPY19L2P1Q6NXN4 242 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 MSL3Q8N5Y2 521 aaKnown RBP23.09■■□□□ 1.29
FGFR1-223ENST00000496296 GLG1Q92896 1179 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 PCYT2Q99447 389 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 STRA6Q9BX79 667 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 IFIH1Q9BYX4 1025 aaKnown RBP23.09■■□□□ 1.29
FGFR1-223ENST00000496296 GBP3Q9H0R5 595 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 GANQ9H2C0 597 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 ST6GALNAC4Q9H4F1 302 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 ANKZF1Q9H8Y5 726 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 GPRC5CQ9NQ84 441 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 MYH11P35749 1972 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 NR3C1P04150 777 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 SERPING1P05155 500 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 VEGFBP49765 207 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 CYP27A1Q02318 531 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 KCNA1Q09470 495 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 LAMC2Q13753 1193 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 HSDL1Q3SXM5 330 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 TAPT1Q6NXT6 567 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 CCDC155Q8N6L0 562 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 SECISBP2LQ93073 1101 aaKnown RBP23.09■■□□□ 1.29
FGFR1-223ENST00000496296 RPGRIP1Q96KN7 1286 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 LSM14BQ9BX40 385 aaKnown RBP23.09■■□□□ 1.29
FGFR1-223ENST00000496296 AIPL1Q9NZN9 384 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 PUF60Q9UHX1 559 aaKnown RBP23.09■■□□□ 1.29
FGFR1-223ENST00000496296 SAR1BQ9Y6B6 198 aa23.09■■□□□ 1.29
FGFR1-223ENST00000496296 RBM47A0AV96 593 aaKnown RBP23.08■■□□□ 1.29
FGFR1-223ENST00000496296 PPP1R37O75864 691 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 RTP1P59025 263 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 KCNH2Q12809 1159 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 C17orf99Q6UX52 265 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 PAXIP1Q6ZW49 1069 aaPredicted RBP23.08■■□□□ 1.29
FGFR1-223ENST00000496296 PLPPR4Q7Z2D5 763 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 HAUS6Q7Z4H7 955 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 TRIM58Q8NG06 486 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 SLC7A3Q8WY07 619 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 ACCSQ96QU6 501 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 TINF2Q9BSI4 451 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 PDLIM7Q9NR12 457 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 ARMCX3Q9UH62 379 aaPredicted RBP23.08■■□□□ 1.29
FGFR1-223ENST00000496296 PPME1Q9Y570 386 aa23.08■■□□□ 1.29
FGFR1-223ENST00000496296 MYH9P35579 1960 aaKnown RBP23.08■■□□□ 1.28
FGFR1-223ENST00000496296 CCDC169A6NNP5 214 aa23.07■■□□□ 1.28
FGFR1-223ENST00000496296 TGFB1I1O43294 461 aa23.07■■□□□ 1.28
FGFR1-223ENST00000496296 LGR5O75473 907 aa23.07■■□□□ 1.28
FGFR1-223ENST00000496296 GH1P01241 217 aa23.07■■□□□ 1.28
FGFR1-223ENST00000496296 ATP1A1P05023 1023 aaKnown RBP23.07■■□□□ 1.28
FGFR1-223ENST00000496296 RFC5P40937 340 aa23.07■■□□□ 1.28
FGFR1-223ENST00000496296 NCKAP1LP55160 1127 aa23.07■■□□□ 1.28
FGFR1-223ENST00000496296 GABPB1Q06547 395 aaPredicted RBP23.07■■□□□ 1.28
FGFR1-223ENST00000496296 SFMBT2Q5VUG0 894 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms