RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 MRGPRGQ86SM5 289 aa4.82□□□□□ -1.64
VPS36-205ENST00000492650 PASD1Q8IV76 773 aa4.82□□□□□ -1.64
VPS36-205ENST00000492650 ZZZ3Q8IYH5 903 aa4.82□□□□□ -1.64
VPS36-205ENST00000492650 HIST1H2AHQ96KK5 128 aa4.82□□□□□ -1.64
VPS36-205ENST00000492650 HIST1H2AJQ99878 128 aa4.82□□□□□ -1.64
VPS36-205ENST00000492650 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
VPS36-205ENST00000492650 GOLGA6L6A8MZA4 724 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 KPNA6O60684 536 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 IPO13O94829 963 aaKnown RBP4.81□□□□□ -1.64
VPS36-205ENST00000492650 FSBPO95073 299 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 PCDH8O95206 1070 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 ATP2A2P16615 1042 aaKnown RBP4.81□□□□□ -1.64
VPS36-205ENST00000492650 CD40P25942 277 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 PURAQ00577 322 aaKnown RBP4.81□□□□□ -1.64
VPS36-205ENST00000492650 TOB2Q14106 344 aaPredicted RBP4.81□□□□□ -1.64
VPS36-205ENST00000492650 CCDC144BQ3MJ40 725 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 LDLRAD3Q86YD5 345 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 NXPE1Q8N323 547 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 MNTQ99583 582 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 OSBPL6Q9BZF3 934 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 PITHD1Q9GZP4 211 aaPredicted RBP4.81□□□□□ -1.64
VPS36-205ENST00000492650 HAPLN2Q9GZV7 340 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 EPC1Q9H2F5 836 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 NRDE2Q9H7Z3 1164 aa4.81□□□□□ -1.64
VPS36-205ENST00000492650 INTS7Q9NVH2 962 aaKnown RBP4.81□□□□□ -1.64
VPS36-205ENST00000492650 RAMP2O60895 175 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 GNAT2P19087 354 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 PTGS2P35354 604 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 SPIDRQ14159 915 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 TCEA2Q15560 299 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 RABL3Q5HYI8 236 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 CREB3L3Q68CJ9 461 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 CNNM4Q6P4Q7 775 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 SYNPOQ8N3V7 929 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 PRRX2Q99811 253 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 TTPALQ9BTX7 342 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 ZMAT4Q9H898 229 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 THG1LQ9NWX6 298 aaKnown RBP4.8□□□□□ -1.64
VPS36-205ENST00000492650 GPRC5BQ9NZH0 403 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 CD2APQ9Y5K6 639 aa4.8□□□□□ -1.64
VPS36-205ENST00000492650 MYPNQ86TC9 1320 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 A0A0A6YYK5 440 aaPredicted RBP4.79□□□□□ -1.64
VPS36-205ENST00000492650 KLRG2A4D1S0 409 aaPredicted RBP4.79□□□□□ -1.64
VPS36-205ENST00000492650 STC2O76061 302 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 F2P00734 622 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 HK1P19367 917 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 RABGGTBP53611 331 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 FSTL1Q12841 308 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 ESPNLQ6ZVH7 1005 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 KIF18BQ86Y91 864 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 ULK2Q8IYT8 1036 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 EFHBQ8N7U6 833 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 MDGA1Q8NFP4 955 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 SLC25A43Q8WUT9 341 aaPredicted RBP4.79□□□□□ -1.64
VPS36-205ENST00000492650 CHTF18Q8WVB6 975 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 ST8SIA2Q92186 375 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 HAS1Q92839 578 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 FERMT2Q96AC1 680 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 SOX7Q9BT81 388 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 ING3Q9NXR8 418 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 USP18Q9UMW8 372 aa4.79□□□□□ -1.64
VPS36-205ENST00000492650 ST20-MTHFSA0A0A6YYL1 179 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 TMEM191CA6NGB0 347 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 ZNF891A8MT65 544 aaPredicted RBP4.78□□□□□ -1.64
VPS36-205ENST00000492650 MTSS1O43312 755 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 ALDH1A2O94788 518 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 GAAP10253 952 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 KPNA1P52294 538 aaPredicted RBP4.78□□□□□ -1.64
VPS36-205ENST00000492650 LRRC32Q14392 662 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 SART3Q15020 963 aaKnown RBP4.78□□□□□ -1.64
VPS36-205ENST00000492650 FAM214AQ32MH5 1076 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 LRRTM3Q86VH5 581 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 HOMER1Q86YM7 354 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 SYNE4Q8N205 404 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 ZNF276Q8N554 614 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 OR5M3Q8NGP4 307 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 DRC1Q96MC2 740 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 ORAI3Q9BRQ5 295 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 USP35Q9P2H5 1018 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 MSRAQ9UJ68 235 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 SORCS3Q9UPU3 1222 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 PCDHB6Q9Y5E3 794 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 DMRT1Q9Y5R6 373 aa4.78□□□□□ -1.64
VPS36-205ENST00000492650 ELL2O00472 640 aaPredicted RBP4.77□□□□□ -1.65
VPS36-205ENST00000492650 NRP1O14786 923 aa4.77□□□□□ -1.65
VPS36-205ENST00000492650 HOXA3O43365 443 aaPredicted RBP4.77□□□□□ -1.65
VPS36-205ENST00000492650 DSG1Q02413 1049 aa4.77□□□□□ -1.65
VPS36-205ENST00000492650 CD69Q07108 199 aa4.77□□□□□ -1.65
VPS36-205ENST00000492650 C1QL3Q5VWW1 255 aa4.77□□□□□ -1.65
VPS36-205ENST00000492650 LAIR1Q6GTX8 287 aa4.77□□□□□ -1.65
VPS36-205ENST00000492650 APBB1IPQ7Z5R6 666 aaPredicted RBP4.77□□□□□ -1.65
VPS36-205ENST00000492650 CPT1CQ8TCG5 803 aa4.77□□□□□ -1.65
VPS36-205ENST00000492650 UBXN4Q92575 508 aa4.77□□□□□ -1.65
VPS36-205ENST00000492650 ZG16BQ96DA0 208 aa4.77□□□□□ -1.65
VPS36-205ENST00000492650 ZNF496Q96IT1 587 aaPredicted RBP4.77□□□□□ -1.65
VPS36-205ENST00000492650 RNPC3Q96LT9 517 aaKnown RBP4.77□□□□□ -1.65
VPS36-205ENST00000492650 GPR101Q96P66 508 aaPredicted RBP4.77□□□□□ -1.65
VPS36-205ENST00000492650 FAM193BQ96PV7 902 aaPredicted RBP4.77□□□□□ -1.65
VPS36-205ENST00000492650 CPPED1Q9BRF8 314 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms