RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PNMA6EA0A0J9YXQ4 647 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 HMX2A2RU54 273 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 EIF1AYO14602 144 aaKnown RBP6.34□□□□□ -1.39
PTPN4-210ENST00000485247 PRKAB2O43741 272 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 IGLV1-40P01703 118 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 CTSBP07858 339 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 GSTM4Q03013 218 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 PCDH1Q08174 1060 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 PDE4CQ08493 712 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 RBL2Q08999 1139 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 COASYQ13057 564 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 MUM1L1Q5H9M0 696 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 ZNF618Q5T7W0 954 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 SLC9C2Q5TAH2 1124 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 NSMFQ6X4W1 530 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 C16orf86Q6ZW13 317 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 TRIM42Q8IWZ5 723 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 FIBCD1Q8N539 461 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 CHMP4CQ96CF2 233 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 C11orf84Q9BUA3 381 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-210ENST00000485247 IFIH1Q9BYX4 1025 aaKnown RBP6.34□□□□□ -1.39
PTPN4-210ENST00000485247 LMAN2LQ9H0V9 348 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 CCDC8Q9H0W5 538 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-210ENST00000485247 CLEC4MQ9H2X3 399 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-210ENST00000485247 GPR108Q9NPR9 543 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 DLL3Q9NYJ7 618 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 CYP39A1Q9NYL5 469 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 DBNLQ9UJU6 430 aaKnown RBP6.34□□□□□ -1.39
PTPN4-210ENST00000485247 FEM1BQ9UK73 627 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 ISY1Q9ULR0 285 aaKnown RBP6.34□□□□□ -1.39
PTPN4-210ENST00000485247 BARX2Q9UMQ3 279 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-210ENST00000485247 MYH8P13535 1937 aa6.34□□□□□ -1.39
PTPN4-210ENST00000485247 MICAL3Q7RTP6 2002 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 CHD8Q9HCK8 2581 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 ATG2AQ2TAZ0 1938 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 ACACBO00763 2458 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 C5orf67F2Z3F1 127 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 TIAF1O95411 115 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 GLP2RO95838 553 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 LMNAP02545 664 aaKnown RBP6.33□□□□□ -1.4
PTPN4-210ENST00000485247 RB1P06400 928 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 NEFLP07196 543 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 GNAI3P08754 354 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 BMP3P12645 472 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 PDE6AP16499 860 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 BMPR1AP36894 532 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 SNAP25P60880 206 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 PDE4BQ07343 736 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 OS9Q13438 667 aaPredicted RBP6.33□□□□□ -1.4
PTPN4-210ENST00000485247 CAMK1Q14012 370 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 PPP2R5BQ15173 497 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 C12orf60Q5U649 245 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 FDX2Q6P4F2 183 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 ADGRD2Q7Z7M1 963 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 RBM23Q86U06 439 aaKnown RBP6.33□□□□□ -1.4
PTPN4-210ENST00000485247 SESTD1Q86VW0 696 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 AMOTL1Q8IY63 956 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 STK11IPQ8N1F8 1099 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 LRRC47Q8N1G4 583 aaKnown RBP6.33□□□□□ -1.4
PTPN4-210ENST00000485247 EFHBQ8N7U6 833 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 KREMEN2Q8NCW0 462 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 MORC4Q8TE76 937 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 PPP2R3CQ969Q6 453 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 CCDC74AQ96AQ1 378 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 ALKBH8Q96BT7 664 aaKnown RBP6.33□□□□□ -1.4
PTPN4-210ENST00000485247 IL17RAQ96F46 866 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 MFSD1Q9H3U5 465 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 SMOC2Q9H3U7 446 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 ARMT1Q9H993 441 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 ABCB6Q9NP58 842 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 SMC4Q9NTJ3 1288 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 HDAC6Q9UBN7 1215 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 CLIP2Q9UDT6 1046 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 GTF2IRD1Q9UHL9 959 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 NOB1Q9ULX3 412 aaKnown RBP6.33□□□□□ -1.4
PTPN4-210ENST00000485247 DMDP11532 3685 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 DNAH14Q0VDD8 3507 aa6.33□□□□□ -1.4
PTPN4-210ENST00000485247 EP300Q09472 2414 aaPredicted RBP6.33□□□□□ -1.4
PTPN4-210ENST00000485247 NLRC5Q86WI3 1866 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ZNF532Q9HCE3 1301 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 VPS13AQ96RL7 3174 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 RBM47A0AV96 593 aaKnown RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 TMEM232C9JQI7 657 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 NKRFO15226 690 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 SART1O43290 800 aaKnown RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 BRD1O95696 1058 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 TGFB1P01137 390 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 MMP1P03956 469 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 LINC00271P0C7V0 271 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 TXNP10599 105 aaKnown RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ATF7P17544 494 aaPredicted RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ITPKAP23677 461 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 THPOP40225 353 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 NRIP1P48552 1158 aa6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ALDH5A1P51649 535 aaPredicted RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 RBM10P98175 930 aaKnown RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 ZNF200P98182 395 aaPredicted RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 IKQ13123 557 aaPredicted RBP6.32□□□□□ -1.4
PTPN4-210ENST00000485247 BAATQ14032 418 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms