RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 VPS33BQ9H267 617 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 TAF1DQ9H5J8 278 aaPredicted RBP22.41■■□□□ 1.18
TMED4-204ENST00000477639 LARSQ9P2J5 1176 aaKnown RBP22.41■■□□□ 1.18
TMED4-204ENST00000477639 MYH11P35749 1972 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 RFX1P22670 979 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 GUCY2FP51841 1108 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 DLG4P78352 724 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 CFAP58Q5T655 872 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 ACCSQ96QU6 501 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 RUFY1Q96T51 708 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 AP1M1Q9BXS5 423 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 OSGEPQ9NPF4 335 aa22.41■■□□□ 1.18
TMED4-204ENST00000477639 TISP43B9A030 160 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 FOXN3O00409 490 aaPredicted RBP22.4■■□□□ 1.18
TMED4-204ENST00000477639 WDR46O15213 610 aaKnown RBP22.4■■□□□ 1.18
TMED4-204ENST00000477639 BUB1BO60566 1050 aaPredicted RBP22.4■■□□□ 1.18
TMED4-204ENST00000477639 KRT13P13646 458 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 PLS3P13797 630 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 QARSP47897 775 aaKnown RBP22.4■■□□□ 1.18
TMED4-204ENST00000477639 SPP2Q13103 211 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 ARHGAP44Q17R89 818 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 NBPF9Q3BBW0 867 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 INTS8Q75QN2 995 aaKnown RBP22.4■■□□□ 1.18
TMED4-204ENST00000477639 CD302Q8IX05 232 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 SYTL5Q8TDW5 730 aaPredicted RBP22.4■■□□□ 1.18
TMED4-204ENST00000477639 PCIF1Q9H4Z3 704 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 NMRK2Q9NPI5 230 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 AMFRQ9UKV5 643 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 IGSF9BQ9UPX0 1349 aa22.4■■□□□ 1.18
TMED4-204ENST00000477639 CCDC188H7C350 402 aa22.39■■□□□ 1.18
TMED4-204ENST00000477639 WNT10BO00744 389 aa22.39■■□□□ 1.18
TMED4-204ENST00000477639 TNFAIP3P21580 790 aa22.39■■□□□ 1.18
TMED4-204ENST00000477639 ECHS1P30084 290 aa22.39■■□□□ 1.18
TMED4-204ENST00000477639 HSPA9P38646 679 aaKnown RBP22.39■■□□□ 1.18
TMED4-204ENST00000477639 C1orf220Q5T0J3 134 aa22.39■■□□□ 1.18
TMED4-204ENST00000477639 JDP2Q8WYK2 163 aa22.39■■□□□ 1.18
TMED4-204ENST00000477639 ZNF233A6NK53 670 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 SART1O43290 800 aaKnown RBP22.39■■□□□ 1.17
TMED4-204ENST00000477639 IRAK1P51617 712 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 VAMP7P51809 220 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 PPP3CAQ08209 521 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 DPY19L2Q6NUT2 758 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 EMSYQ7Z589 1322 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 CTNNBL1Q8WYA6 563 aaPredicted RBP22.39■■□□□ 1.17
TMED4-204ENST00000477639 ARHGEF26Q96DR7 871 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 ST6GALNAC4Q9H4F1 302 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 TAS2R14Q9NYV8 317 aa22.39■■□□□ 1.17
TMED4-204ENST00000477639 TTC7AQ9ULT0 858 aaPredicted RBP22.39■■□□□ 1.17
TMED4-204ENST00000477639 GLTPD2A6NH11 291 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 KRIT1O00522 736 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 P4HA2O15460 535 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 DDX3YO15523 660 aaKnown RBP22.38■■□□□ 1.17
TMED4-204ENST00000477639 PPFIA4O75335 1185 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 ALAS1P13196 640 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 CUL1Q13616 776 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 NIM1KQ8IY84 436 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 LPAR1Q92633 364 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 AGPAT1Q99943 283 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 CBWD1Q9BRT8 395 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 SLC38A10Q9HBR0 1119 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 RAVER2Q9HCJ3 691 aaKnown RBP22.38■■□□□ 1.17
TMED4-204ENST00000477639 PPP1R9AQ9ULJ8 1098 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 ITGA4P13612 1032 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 SKOR1P84550 965 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 GTF2BQ00403 316 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 MTMR1Q13613 665 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 EPC2Q52LR7 807 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 PALB2Q86YC2 1186 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 ARHGEF19Q8IW93 802 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 CPXCR1Q8N123 301 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 TAAR1Q96RJ0 339 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 KIAA1683Q9H0B3 1180 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 TBC1D22BQ9NU19 505 aa22.38■■□□□ 1.17
TMED4-204ENST00000477639 MAP3K20Q9NYL2 800 aaKnown RBP22.38■■□□□ 1.17
TMED4-204ENST00000477639 ABCB4P21439 1286 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 MCCD1P59942 119 aaPredicted RBP22.37■■□□□ 1.17
TMED4-204ENST00000477639 CXCL9Q07325 125 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 PLEKHO2Q8TD55 490 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 VTI1AQ96AJ9 217 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 CAPS2Q9BXY5 557 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 DDX47Q9H0S4 455 aaKnown RBP22.37■■□□□ 1.17
TMED4-204ENST00000477639 SLITRK6Q9H5Y7 841 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 RRAGCQ9HB90 399 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 UBE2TQ9NPD8 197 aaPredicted RBP22.37■■□□□ 1.17
TMED4-204ENST00000477639 LCMT1Q9UIC8 334 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 SAMM50Q9Y512 469 aa22.37■■□□□ 1.17
TMED4-204ENST00000477639 ANKRD62A6NC57 917 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 MAPK13O15264 365 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 DDNO94850 711 aaPredicted RBP22.36■■□□□ 1.17
TMED4-204ENST00000477639 YWHABP31946 246 aaKnown RBP22.36■■□□□ 1.17
TMED4-204ENST00000477639 UGCGQ16739 394 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 HAUS6Q7Z4H7 955 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 SRLQ86TD4 932 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 SAMD3Q8N6K7 520 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 XXYLT1Q8NBI6 393 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 TRERF1Q96PN7 1200 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 TIPINQ9BVW5 301 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 THAP2Q9H0W7 228 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 HSPBP1Q9NZL4 362 aa22.36■■□□□ 1.17
TMED4-204ENST00000477639 USP20Q9Y2K6 914 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms