RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 DAW1Q8N136 415 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 PDILTQ8N807 584 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 C2orf40Q9H1Z8 148 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 C17orf75Q9HAS0 396 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 DACT1Q9NYF0 836 aa16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 CIZ1Q9ULV3 898 aaPredicted RBP16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 PIN4Q9Y237 131 aaKnown RBP16.05■□□□□ 0.16
SQSTM1-205ENST00000464493 A0A087X0B3 334 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 NPHP3-ACAD11A0A0J9YXS1 232 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 SFI1A8K8P3 1242 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 ERLIN2O94905 339 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 STAG3L1P0CL83 205 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 IBSPP21815 317 aaPredicted RBP16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 STAT6P42226 847 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 PEX3P56589 373 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 FAM189BP81408 668 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 HTRA4P83105 476 aaPredicted RBP16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 MAPK7Q13164 816 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 CDCA2Q69YH5 1023 aaPredicted RBP16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 NPAS4Q8IUM7 802 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 CRIPAKQ8N1N5 446 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 NKX2-4Q9H2Z4 354 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 SLC28A3Q9HAS3 691 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 AGPAT5Q9NUQ2 364 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 FAM13BQ9NYF5 915 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 KCNG1Q9UIX4 513 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 LRFN2Q9ULH4 789 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 PCDHB7Q9Y5E2 793 aa16.04■□□□□ 0.16
SQSTM1-205ENST00000464493 TMEM265A0A087WTH1 108 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 A0A0U1RQF3 1178 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 CCDC169A6NNP5 214 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 KRT18P05783 430 aaKnown RBP16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 CA3P07451 260 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 AXLP30530 894 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 HOXA11P31270 313 aaPredicted RBP16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 NPTX2P47972 431 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 DMP1Q13316 513 aaPredicted RBP16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 GIT2Q14161 759 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 ZNF697Q5TEC3 545 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 ADALQ6DHV7 355 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 SV2BQ7L1I2 683 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 YME1L1Q96TA2 773 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 FZD8Q9H461 694 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 ODF2LQ9ULJ1 636 aa16.03■□□□□ 0.16
SQSTM1-205ENST00000464493 MYH11P35749 1972 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 LCHNA4D1U4 455 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 TSPAN1O60635 241 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 DGKIO75912 1065 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 PLS3P13797 630 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 EFNA5P52803 228 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 MAPK6Q16659 721 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 AMHR2Q16671 573 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 FAM187BQ17R55 369 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 PPP2R2DQ66LE6 453 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 ECHDC2Q86YB7 292 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 IQUBQ8NA54 791 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 PRIMPOLQ96LW4 560 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 REEP2Q9BRK0 252 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 NTPCRQ9BSD7 190 aaKnown RBP16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 KIFC3Q9BVG8 833 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 TRAIPQ9BWF2 469 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 ZNF576Q9H609 170 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 ELAC1Q9H777 363 aaKnown RBP16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 KMT5AQ9NQR1 393 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 PRMT7Q9NVM4 692 aaPredicted RBP16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 TMEM161AQ9NX61 479 aa16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.16
SQSTM1-205ENST00000464493 CHD9Q3L8U1 2897 aa16.02■□□□□ 0.15
SQSTM1-205ENST00000464493 ADGRA3Q8IWK6 1321 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 K7ERI5 159 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 POLR2DO15514 142 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 EOMESO95936 686 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 SKIP12755 728 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 ARF4P18085 180 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 CMA1P23946 247 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 SMTNP53814 917 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 E2F4Q16254 413 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 NOTUMQ6P988 496 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 Q7L0L9 218 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 DEFB123Q8N688 67 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 SPIRE2Q8WWL2 714 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 DHX58Q96C10 678 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 ZNF689Q96CS4 500 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 CPB2Q96IY4 423 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 TTYH1Q9H313 450 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 CUEDC2Q9H467 287 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 GDPD2Q9HCC8 539 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 FAM105AQ9NUU6 356 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 LARSQ9P2J5 1176 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 CDH23Q9H251 3354 aa16.01■□□□□ 0.15
SQSTM1-205ENST00000464493 MYMKA6NI61 221 aa16■□□□□ 0.15
SQSTM1-205ENST00000464493 ACKR2O00590 384 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms