RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 HLA-DOAP06340 250 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 NBPF7P0C2Y1 421 aaPredicted RBP6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 RSPH10BP0C881 870 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 ADH6P28332 368 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 GRNP28799 593 aaKnown RBP6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 ZNF252P-AS1Q0IIN9 211 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 FZD5Q13467 585 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 BTG3Q14201 252 aaPredicted RBP6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 SF3A2Q15428 464 aaKnown RBP6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 KIAA1841Q6NSI8 718 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 CES5AQ6NT32 575 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 EEPD1Q7L9B9 569 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 TMC7Q7Z402 723 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 RSAD2Q8WXG1 361 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 CLDN23Q96B33 292 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 UBL7Q96S82 380 aaPredicted RBP6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 DNAJC25Q9H1X3 360 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 BICC1Q9H694 974 aaKnown RBP6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 VTA1Q9NP79 307 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 IFT57Q9NWB7 429 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 ABI2Q9NYB9 513 aaPredicted RBP6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 HDAC6Q9UBN7 1215 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 KLK13Q9UKR3 277 aa6.37□□□□□ -1.39
SBDSP1-204ENST00000453858 PLXNA4Q9HCM2 1894 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 HIDE1A8MVS5 230 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 E9PSI1 815 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 F6X3S4 739 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 RNF225M0QZC1 329 aaPredicted RBP6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 ENPP3O14638 875 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 TREHO43280 583 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 N4BP1O75113 896 aaKnown RBP6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 SASH3O75995 380 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 PSAPP07602 524 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 ZNF806P0C7X5 589 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 RARAP10276 462 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 SRFP11831 508 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 SOX18P35713 384 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 NOVA1P51513 510 aaKnown RBP6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 UBE3AQ05086 875 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 TRIP4Q15650 581 aaPredicted RBP6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 ATP2B3Q16720 1220 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 LLGL2Q6P1M3 1020 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 XRRA1Q6P2D8 792 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 DNAJC14Q6Y2X3 702 aaPredicted RBP6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 RASGRP2Q7LDG7 609 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 GOLGA6L1Q8N7Z2 621 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 C12orf76Q8N812 135 aaPredicted RBP6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 LSM14AQ8ND56 463 aaKnown RBP6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 CHST13Q8NET6 341 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 MICAL1Q8TDZ2 1067 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 SNX29Q8TEQ0 813 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 SEPT8Q92599 483 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 BHMTQ93088 406 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 SLC30A3Q99726 388 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 MYL10Q9BUA6 226 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 OSBPL6Q9BZF3 934 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 ARHGEF3Q9NR81 526 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 TLR7Q9NYK1 1049 aaKnown RBP6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 USP20Q9Y2K6 914 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 FOCADQ5VW36 1801 aa6.36□□□□□ -1.39
SBDSP1-204ENST00000453858 F5P12259 2224 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 ANKRD33BA6NCL7 494 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 C2CD2LO14523 706 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 HYAL3O43820 417 aaPredicted RBP6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 SRGAP2BP0DMP2 458 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 DSC3Q14574 896 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 COLEC12Q5KU26 742 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 ATAT1Q5SQI0 421 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 DCLRE1AQ6PJP8 1040 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 PI16Q6UXB8 463 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 SYT9Q86SS6 491 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 SERINC5Q86VE9 423 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 CLEC10AQ8IUN9 316 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 OR6J1Q8NGC5 347 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 COPS5Q92905 334 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 TNFRSF25Q93038 417 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 CRELD1Q96HD1 420 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 A1CFQ9NQ94 594 aaKnown RBP6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 SLC2A4RGQ9NR83 387 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 HMG20BQ9P0W2 317 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 FBXO40Q9UH90 709 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 HCN2Q9UL51 889 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 RAB23Q9ULC3 237 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 HCFC2Q9Y5Z7 792 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 AHCTF1Q8WYP5 2266 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 AKAP9Q99996 3911 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 GREB1Q4ZG55 1949 aa6.35□□□□□ -1.39
SBDSP1-204ENST00000453858 DENND4AQ7Z401 1863 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 KIAA1671Q9BY89 1806 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 TLN1Q9Y490 2541 aaKnown RBP6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 ADARB2-AS1A8MUL3 147 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 HAS3O00219 553 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 MAFO75444 373 aaPredicted RBP6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 TNFRSF21O75509 655 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 BAG3O95817 575 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 CEACAM1P13688 526 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 NFKB1P19838 968 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 TARSP26639 723 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms