RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SMG8Q8ND04 991 aaKnown RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 POF1BQ8WVV4 589 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 TCP11Q8WWU5 503 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 P2RX5Q93086 422 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 CPB2Q96IY4 423 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 PLVAPQ9BX97 442 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 EIF2AQ9BY44 585 aaKnown RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 POLR3FQ9H1D9 316 aaPredicted RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 UBE2ZQ9H832 354 aaPredicted RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 CHST12Q9NRB3 414 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 AGPAT5Q9NUQ2 364 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 FAM105AQ9NUU6 356 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 LRWD1Q9UFC0 647 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 PLXNA4Q9HCM2 1894 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 XIRP2A4UGR9 3374 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 TCF20Q9UGU0 1960 aaKnown RBP14.17□□□□□ -0.14
GPC1-204ENST00000426280 E9PMD0 336 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 ASAP2O43150 1006 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 TSPAN1O60635 241 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 OFD1O75665 1012 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 FGF18O76093 207 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 EOMESO95936 686 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 SFPQP23246 707 aaKnown RBP eCLIP14.17□□□□□ -0.14
GPC1-204ENST00000426280 CCT6AP40227 531 aaKnown RBP14.17□□□□□ -0.14
GPC1-204ENST00000426280 MBTD1Q05BQ5 628 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 COL19A1Q14993 1142 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 PTPROQ16827 1216 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
GPC1-204ENST00000426280 PADI6Q6TGC4 694 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 TMEM173Q86WV6 379 aaPredicted RBP14.17□□□□□ -0.14
GPC1-204ENST00000426280 ADAMTS19Q8TE59 1207 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 NACC1Q96RE7 527 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 TRAIPQ9BWF2 469 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 INO80BQ9C086 356 aaPredicted RBP14.17□□□□□ -0.14
GPC1-204ENST00000426280 NSUN3Q9H649 340 aaKnown RBP14.17□□□□□ -0.14
GPC1-204ENST00000426280 IGFLR1Q9H665 355 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 CD320Q9NPF0 282 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 DBR1Q9UK59 544 aaKnown RBP14.17□□□□□ -0.14
GPC1-204ENST00000426280 KIAA1024Q9UPX6 916 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 RWDD3Q9Y3V2 267 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 PCDHB2Q9Y5E7 798 aa14.17□□□□□ -0.14
GPC1-204ENST00000426280 H3BQ06 376 aaPredicted RBP14.16□□□□□ -0.14
GPC1-204ENST00000426280 ZNF623O75123 536 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 KCNA5P22460 613 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 GRIN1Q05586 938 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 PDIA5Q14554 519 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 SPOUT1Q5T280 376 aaKnown RBP14.16□□□□□ -0.14
GPC1-204ENST00000426280 FAM173BQ6P4H8 233 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 MRPL10Q7Z7H8 261 aaKnown RBP14.16□□□□□ -0.14
GPC1-204ENST00000426280 ZNF280BQ86YH2 543 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
GPC1-204ENST00000426280 LRRC15Q8TF66 581 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 BCL7CQ8WUZ0 217 aaPredicted RBP14.16□□□□□ -0.14
GPC1-204ENST00000426280 PNMA5Q96PV4 448 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 PLIN2Q99541 437 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 LMAN2LQ9H0V9 348 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 CXCL16Q9H2A7 254 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 DDX19AQ9NUU7 478 aaKnown RBP14.16□□□□□ -0.14
GPC1-204ENST00000426280 MIOSQ9NXC5 875 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 COG5Q9UP83 839 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 HES2Q9Y543 173 aa14.16□□□□□ -0.14
GPC1-204ENST00000426280 SPTBN5Q9NRC6 3674 aaKnown RBP14.16□□□□□ -0.14
GPC1-204ENST00000426280 H3BQV1 296 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 INO80B-WBP1J3KQ70 363 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 PER2O15055 1255 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 GAS2O43903 313 aaKnown RBP14.15□□□□□ -0.14
GPC1-204ENST00000426280 DDHD2O94830 711 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 IL9P15248 144 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 ARF4P18085 180 aaPredicted RBP14.15□□□□□ -0.14
GPC1-204ENST00000426280 CYP11B2P19099 503 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 ATP2C1P98194 919 aaPredicted RBP14.15□□□□□ -0.14
GPC1-204ENST00000426280 CTC1Q2NKJ3 1217 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 KCNT2Q6UVM3 1135 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 FAM43BQ6ZT52 329 aaPredicted RBP14.15□□□□□ -0.14
GPC1-204ENST00000426280 RBM23Q86U06 439 aaKnown RBP14.15□□□□□ -0.14
GPC1-204ENST00000426280 EXOC8Q8IYI6 725 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 INTS4Q96HW7 963 aaKnown RBP14.15□□□□□ -0.14
GPC1-204ENST00000426280 BHMT2Q9H2M3 363 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 NRDE2Q9H7Z3 1164 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 DACT1Q9NYF0 836 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 DNAJB4Q9UDY4 337 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 KIF3AQ9Y496 699 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 VCANP13611 3396 aa14.15□□□□□ -0.14
GPC1-204ENST00000426280 MYO7AQ13402 2215 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 FSCN2O14926 492 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 PRPHP41219 470 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 POU5F1BQ06416 359 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 ADAM15Q13444 863 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 MXD4Q14582 209 aaPredicted RBP14.14□□□□□ -0.15
GPC1-204ENST00000426280 LEXMQ3ZCV2 418 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 TIGD5Q53EQ6 642 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 NAALADL2Q58DX5 795 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 RILPL1Q5EBL4 403 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 EP400NLQ6ZTU2 488 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 THNSL1Q8IYQ7 743 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 DAW1Q8N136 415 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 SLC39A11Q8N1S5 342 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 VN1R2Q8NFZ6 395 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms