RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 MCM7P33993 719 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 ERVFC1P60507 584 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 FERMT3Q86UX7 667 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 RSPH1Q8WYR4 309 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 TMEM60Q9H2L4 133 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 EPHX3Q9H6B9 360 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 ANKEF1Q9NU02 776 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 AGPAT5Q9NUQ2 364 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 PRKAG3Q9UGI9 489 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 CD207Q9UJ71 328 aa28.45■■■□□ 2.14
SMDT1-202ENST00000422252 ARID2Q68CP9 1835 aa28.44■■■□□ 2.14
SMDT1-202ENST00000422252 PBX3P40426 434 aa28.44■■■□□ 2.14
SMDT1-202ENST00000422252 RNF149Q8NC42 400 aa28.44■■■□□ 2.14
SMDT1-202ENST00000422252 KHSRPQ92945 711 aaKnown RBP eCLIP28.44■■■□□ 2.14
SMDT1-202ENST00000422252 LPPQ93052 612 aa28.44■■■□□ 2.14
SMDT1-202ENST00000422252 FOXP1Q9H334 677 aaPredicted RBP28.44■■■□□ 2.14
SMDT1-202ENST00000422252 MINDY3Q9H8M7 445 aa28.44■■■□□ 2.14
SMDT1-202ENST00000422252 XPNPEP1Q9NQW7 623 aa28.44■■■□□ 2.14
SMDT1-202ENST00000422252 SPG21Q9NZD8 308 aa28.44■■■□□ 2.14
SMDT1-202ENST00000422252 POTEMA6NI47 508 aa28.43■■■□□ 2.14
SMDT1-202ENST00000422252 MBTPS2O43462 519 aa28.43■■■□□ 2.14
SMDT1-202ENST00000422252 ZNF623O75123 536 aa28.43■■■□□ 2.14
SMDT1-202ENST00000422252 KRT17Q04695 432 aa28.43■■■□□ 2.14
SMDT1-202ENST00000422252 SMAD4Q13485 552 aaKnown RBP28.43■■■□□ 2.14
SMDT1-202ENST00000422252 SMAD2Q15796 467 aaKnown RBP28.43■■■□□ 2.14
SMDT1-202ENST00000422252 FAM184AQ8NB25 1140 aa28.43■■■□□ 2.14
SMDT1-202ENST00000422252 FBXO18Q8NFZ0 1043 aa28.43■■■□□ 2.14
SMDT1-202ENST00000422252 MSLNLQ96KJ4 702 aa28.43■■■□□ 2.14
SMDT1-202ENST00000422252 CLEC1BQ9P126 229 aa28.43■■■□□ 2.14
SMDT1-202ENST00000422252 DGAT1O75907 488 aa28.42■■■□□ 2.14
SMDT1-202ENST00000422252 RBM25P49756 843 aaKnown RBP28.42■■■□□ 2.14
SMDT1-202ENST00000422252 MXD4Q14582 209 aaPredicted RBP28.42■■■□□ 2.14
SMDT1-202ENST00000422252 LONRF3Q496Y0 759 aa28.42■■■□□ 2.14
SMDT1-202ENST00000422252 CCDC43Q96MW1 224 aaKnown RBP28.42■■■□□ 2.14
SMDT1-202ENST00000422252 CDCA3Q99618 268 aaPredicted RBP28.42■■■□□ 2.14
SMDT1-202ENST00000422252 FSD2A1L4K1 749 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 PER2O15055 1255 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 GLP2RO95838 553 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 ZP2Q05996 745 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 ORC2Q13416 577 aaPredicted RBP28.41■■■□□ 2.14
SMDT1-202ENST00000422252 PLPP4Q5VZY2 271 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 GLB1LQ6UWU2 654 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 ADHFE1Q8IWW8 467 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 SLC39A11Q8N1S5 342 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 PGBD4Q96DM1 585 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 TCF25Q9BQ70 676 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 NGRNQ9NPE2 291 aaKnown RBP28.41■■■□□ 2.14
SMDT1-202ENST00000422252 ENTPD7Q9NQZ7 604 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 PCDHB2Q9Y5E7 798 aa28.41■■■□□ 2.14
SMDT1-202ENST00000422252 MEIS3P2A8K0S8 358 aa28.4■■■□□ 2.14
SMDT1-202ENST00000422252 HOXA11P31270 313 aaPredicted RBP28.4■■■□□ 2.14
SMDT1-202ENST00000422252 ALDH7A1P49419 539 aaKnown RBP28.4■■■□□ 2.14
SMDT1-202ENST00000422252 RARRES1P49788 294 aa28.4■■■□□ 2.14
SMDT1-202ENST00000422252 GNL2Q13823 731 aaKnown RBP28.4■■■□□ 2.14
SMDT1-202ENST00000422252 DUSP6Q16828 381 aa28.4■■■□□ 2.14
SMDT1-202ENST00000422252 PIGOQ8TEQ8 1089 aa28.4■■■□□ 2.14
SMDT1-202ENST00000422252 BARX2Q9UMQ3 279 aaPredicted RBP28.4■■■□□ 2.14
SMDT1-202ENST00000422252 PI4K2BG5E9Z4 385 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 EYA4O95677 639 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 XRCC6P12956 609 aaKnown RBP eCLIP28.39■■■□□ 2.14
SMDT1-202ENST00000422252 BCAR1P56945 870 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 PTENP60484 403 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 COASYQ13057 564 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 TFDP1Q14186 410 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 PCBP1Q15365 356 aaKnown RBP eCLIP28.39■■■□□ 2.14
SMDT1-202ENST00000422252 ZNF174Q15697 407 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 NOMO2Q5JPE7 1267 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 NOSTRINQ8IVI9 506 aa28.39■■■□□ 2.14
SMDT1-202ENST00000422252 C19orf67A6NJJ6 358 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 ZC3H11AO75152 810 aaKnown RBP eCLIP28.38■■■□□ 2.13
SMDT1-202ENST00000422252 OFD1O75665 1012 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 ERLIN2O94905 339 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 OR52Z1P0C646 297 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 SPATA31C1P0DKV0 1188 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 COL9A1P20849 921 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 MRPL10Q7Z7H8 261 aaKnown RBP28.38■■■□□ 2.13
SMDT1-202ENST00000422252 SMRP1Q8NCR6 262 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 TUFT1Q9NNX1 390 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 TBC1D13Q9NVG8 400 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 INPP5FQ9Y2H2 1132 aa28.38■■■□□ 2.13
SMDT1-202ENST00000422252 A0A087WWV3 80 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 CARNS1A5YM72 827 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 NT5C1B-RDH14C9J2C7 533 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 ARL2P36404 184 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 TECP42680 631 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 POU5F1BQ06416 359 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 RABEP1Q15276 862 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 TTC38Q5R3I4 469 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 UBXN11Q5T124 520 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 TMC7Q7Z402 723 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 CATSPER3Q86XQ3 398 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 IFNLR1Q8IU57 520 aaPredicted RBP28.37■■■□□ 2.13
SMDT1-202ENST00000422252 VN1R2Q8NFZ6 395 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 ASAP3Q8TDY4 903 aa28.37■■■□□ 2.13
SMDT1-202ENST00000422252 HIDE1A8MVS5 230 aa28.36■■■□□ 2.13
SMDT1-202ENST00000422252 TRAPPC10P48553 1259 aa28.36■■■□□ 2.13
SMDT1-202ENST00000422252 RNASELQ05823 741 aaKnown RBP28.36■■■□□ 2.13
SMDT1-202ENST00000422252 CAPSQ13938 189 aa28.36■■■□□ 2.13
SMDT1-202ENST00000422252 AGMOQ6ZNB7 445 aa28.36■■■□□ 2.13
SMDT1-202ENST00000422252 TMEM169Q96HH4 297 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms