RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 FERP16591 822 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 DPY19L2P1Q6NXN4 242 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 ZCWPW1Q9H0M4 648 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 NT5C3AQ9H0P0 336 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 ARL2BPQ9Y2Y0 163 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 DLEC1Q9Y238 1755 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 GOLGB1Q14789 3259 aaKnown RBP17.91■□□□□ 0.46
PKP4-204ENST00000421462 HOXD13P35453 343 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 CALCOCO2Q13137 446 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 MPP2Q14168 576 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 KYNUQ16719 465 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 CDCA2Q69YH5 1023 aaPredicted RBP17.91■□□□□ 0.46
PKP4-204ENST00000421462 KCTD1Q719H9 257 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 C1orf54Q8WWF1 131 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 CRAMP1Q96RY5 1269 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 STMN4Q9H169 189 aaPredicted RBP17.91■□□□□ 0.46
PKP4-204ENST00000421462 CDC42EP4Q9H3Q1 356 aaKnown RBP17.91■□□□□ 0.46
PKP4-204ENST00000421462 ASIC3Q9UHC3 531 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 HAO1Q9UJM8 370 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 TOGARAM1Q9Y4F4 1720 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 LINGO3P0C6S8 592 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 PRKCIP41743 596 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 FRMD5Q7Z6J6 570 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 EGFL6Q8IUX8 553 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 SLC20A1Q8WUM9 679 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 CARD9Q9H257 536 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 DHX36Q9H2U1 1008 aaKnown RBP17.9■□□□□ 0.46
PKP4-204ENST00000421462 DPPA5A6NC42 116 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 FAM187AA6NFU0 413 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 PHF2O75151 1096 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 SOX5P35711 763 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 MARSP56192 900 aaKnown RBP17.9■□□□□ 0.46
PKP4-204ENST00000421462 MXRA7P84157 204 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 COG2Q14746 738 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 ZC2HC1CQ53FD0 456 aaPredicted RBP17.9■□□□□ 0.46
PKP4-204ENST00000421462 SLURP2P0DP57 97 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 INHBEP58166 350 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 DHX34Q14147 1143 aaKnown RBP17.9■□□□□ 0.46
PKP4-204ENST00000421462 PRR16Q569H4 304 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 NSMFQ6X4W1 530 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 INTS8Q75QN2 995 aaKnown RBP17.9■□□□□ 0.46
PKP4-204ENST00000421462 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 LONP2Q86WA8 852 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 FAM118BQ9BPY3 351 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 ZFATQ9P243 1243 aa17.9■□□□□ 0.46
PKP4-204ENST00000421462 CALUO43852 315 aaPredicted RBP17.89■□□□□ 0.45
PKP4-204ENST00000421462 LGR5O75473 907 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 DLATP10515 647 aaKnown RBP17.89■□□□□ 0.45
PKP4-204ENST00000421462 PTGIRP43119 386 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 ZNF131P52739 623 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 ITPK1Q13572 414 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 EDRF1Q3B7T1 1238 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 PRUNE1Q86TP1 453 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 ERP27Q96DN0 273 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 SH3GL3Q99963 347 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 TRIM7Q9C029 511 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 TAOK3Q9H2K8 898 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 BHMT2Q9H2M3 363 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 PSTPIP2Q9H939 334 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 ACP6Q9NPH0 428 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 SPDYE5A6NIY4 337 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 SPOPO43791 374 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 SPAG7O75391 227 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 PYGMP11217 842 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 VCAM1P19320 739 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 LMNB1P20700 586 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 TUBP50607 506 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 SNAP25P60880 206 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 MGAT5Q09328 741 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 CAPN12Q6ZSI9 719 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 SPOCK2Q92563 424 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 LRP5O75197 1615 aa17.89■□□□□ 0.45
PKP4-204ENST00000421462 KIF3CO14782 793 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 FTLP02792 175 aaPredicted RBP17.88■□□□□ 0.45
PKP4-204ENST00000421462 NMT1P30419 496 aaKnown RBP17.88■□□□□ 0.45
PKP4-204ENST00000421462 CHKAP35790 457 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 BTDP43251 543 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 BLMHQ13867 455 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 GIT2Q14161 759 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 HP1BP3Q5SSJ5 553 aaPredicted RBP17.88■□□□□ 0.45
PKP4-204ENST00000421462 RBM26Q5T8P6 1007 aaKnown RBP17.88■□□□□ 0.45
PKP4-204ENST00000421462 SEL1L2Q5TEA6 688 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 VSTM1Q6UX27 236 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 PHLDB2Q86SQ0 1253 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 FBF1Q8TES7 1133 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 SPIRE2Q8WWL2 714 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 RUSC1Q9BVN2 902 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 PPP1R12CQ9BZL4 782 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 PIDD1Q9HB75 910 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 ARHGEF3Q9NR81 526 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 PAPPAQ13219 1627 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 A0A0A6YYK5 440 aaPredicted RBP17.88■□□□□ 0.45
PKP4-204ENST00000421462 USP17L10C9JJH3 530 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 PPP1R11O60927 126 aaPredicted RBP17.88■□□□□ 0.45
PKP4-204ENST00000421462 TMEM253P0C7T8 217 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 ATP4AP20648 1035 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 COMTP21964 271 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 JAM2P57087 298 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 PPATQ06203 517 aa17.88■□□□□ 0.45
PKP4-204ENST00000421462 SEPT2Q15019 361 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms