RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 DDX19AQ9NUU7 478 aaKnown RBP23.73■■□□□ 1.39
CPNE1-211ENST00000420363 KIAA1024Q9UPX6 916 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 BRWD1Q9NSI6 2320 aa23.73■■□□□ 1.39
CPNE1-211ENST00000420363 A0A0U1RQF3 1178 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 CSDE1O75534 798 aaKnown RBP23.72■■□□□ 1.39
CPNE1-211ENST00000420363 SRGAP2CP0DJJ0 459 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 KCNA5P22460 613 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 GPM6BQ13491 265 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 CAPSQ13938 189 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 PADI6Q6TGC4 694 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 TMEM192Q8IY95 271 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 ASAP3Q8TDY4 903 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 RSPH1Q8WYR4 309 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 NT5C3AQ9H0P0 336 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 BHMT2Q9H2M3 363 aa23.72■■□□□ 1.39
CPNE1-211ENST00000420363 PIN4Q9Y237 131 aaKnown RBP23.72■■□□□ 1.39
CPNE1-211ENST00000420363 MORC2Q9Y6X9 1032 aaPredicted RBP23.72■■□□□ 1.39
CPNE1-211ENST00000420363 A0A087WWV3 80 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 C5orf67F2Z3F1 127 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 H3BNC9 293 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 CYP11B2P19099 503 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 GLRA2P23416 452 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 RAB27AP51159 221 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 SF3A1Q15459 793 aaKnown RBP23.71■■□□□ 1.39
CPNE1-211ENST00000420363 LEXMQ3ZCV2 418 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 ECHDC2Q86YB7 292 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 MINDY3Q9H8M7 445 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 DNM3Q9UQ16 869 aa23.71■■□□□ 1.39
CPNE1-211ENST00000420363 EYA4O95677 639 aa23.7■■□□□ 1.38
CPNE1-211ENST00000420363 EOMESO95936 686 aa23.7■■□□□ 1.38
CPNE1-211ENST00000420363 RB1P06400 928 aa23.7■■□□□ 1.38
CPNE1-211ENST00000420363 HSP90AA1P07900 732 aaKnown RBP23.7■■□□□ 1.38
CPNE1-211ENST00000420363 SKIP12755 728 aa23.7■■□□□ 1.38
CPNE1-211ENST00000420363 PLVAPQ9BX97 442 aa23.7■■□□□ 1.38
CPNE1-211ENST00000420363 CDC25AP30304 524 aa23.69■■□□□ 1.38
CPNE1-211ENST00000420363 LONP1P36776 959 aaKnown RBP23.69■■□□□ 1.38
CPNE1-211ENST00000420363 TIGD5Q53EQ6 642 aa23.69■■□□□ 1.38
CPNE1-211ENST00000420363 CDCA2Q69YH5 1023 aaPredicted RBP23.69■■□□□ 1.38
CPNE1-211ENST00000420363 TWF2Q6IBS0 349 aaKnown RBP23.69■■□□□ 1.38
CPNE1-211ENST00000420363 ZNF598Q86UK7 904 aaKnown RBP23.69■■□□□ 1.38
CPNE1-211ENST00000420363 CCDC51Q96ER9 411 aa23.69■■□□□ 1.38
CPNE1-211ENST00000420363 TMEM117Q9H0C3 514 aa23.69■■□□□ 1.38
CPNE1-211ENST00000420363 MRPL42Q9Y6G3 142 aaKnown RBP23.69■■□□□ 1.38
CPNE1-211ENST00000420363 ERLIN2O94905 339 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 AXLP30530 894 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 CTNNB1P35222 781 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 BMPR1AP36894 532 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 MBTD1Q05BQ5 628 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 PTPAQ15257 358 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 FAM102BQ5T8I3 360 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-211ENST00000420363 KIFAP3Q92845 792 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 C11orf84Q9BUA3 381 aaPredicted RBP23.68■■□□□ 1.38
CPNE1-211ENST00000420363 GPRC5CQ9NQ84 441 aa23.68■■□□□ 1.38
CPNE1-211ENST00000420363 ZNF623O75123 536 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 ATF7P17544 494 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-211ENST00000420363 GATMP50440 423 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 PPP2R5AQ15172 486 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 TMEM119Q4V9L6 283 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 NAALADL2Q58DX5 795 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 TMEM31Q5JXX7 168 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 PTCRAQ6ISU1 281 aaPredicted RBP23.67■■□□□ 1.38
CPNE1-211ENST00000420363 P2RX5Q93086 422 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 CDK5RAP3Q96JB5 506 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 LRFN3Q9BTN0 628 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 TIPINQ9BVW5 301 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 C2orf40Q9H1Z8 148 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 FAM105AQ9NUU6 356 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 RNF19AQ9NV58 838 aa23.67■■□□□ 1.38
CPNE1-211ENST00000420363 TBKBP1A7MCY6 615 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 E9PMD0 336 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 TSPAN1O60635 241 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 HOXA11P31270 313 aaPredicted RBP23.66■■□□□ 1.38
CPNE1-211ENST00000420363 NAMPTP43490 491 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 PUS10Q3MIT2 529 aaKnown RBP23.66■■□□□ 1.38
CPNE1-211ENST00000420363 PAN2Q504Q3 1202 aaKnown RBP23.66■■□□□ 1.38
CPNE1-211ENST00000420363 EP400NLQ6ZTU2 488 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 CABP7Q86V35 215 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 LRRC43Q8N309 656 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 FAM122AQ96E09 287 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 PRIMPOLQ96LW4 560 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 PNMA5Q96PV4 448 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 CLIC4Q9Y696 253 aa23.66■■□□□ 1.38
CPNE1-211ENST00000420363 LRRIQ4A6NIV6 560 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 INO80B-WBP1J3KQ70 363 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 FGFR1P11362 822 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 IBSPP21815 317 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-211ENST00000420363 UBA7P41226 1012 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 NCBP1Q09161 790 aaKnown RBP23.65■■□□□ 1.38
CPNE1-211ENST00000420363 AMHR2Q16671 573 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 TCEAL5Q5H9L2 206 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 NOTUMQ6P988 496 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 PPP4R3CPQ6ZMV5 832 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 MAEAQ7L5Y9 396 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 KCNK18Q7Z418 384 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 ZBTB8OSQ8IWT0 167 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 FAM178BQ8IXR5 827 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 ABI1Q8IZP0 508 aa23.65■■□□□ 1.38
CPNE1-211ENST00000420363 KHSRPQ92945 711 aaKnown RBP eCLIP23.65■■□□□ 1.388e-8■■■□□ 15.7
CPNE1-211ENST00000420363 CASD1Q96PB1 797 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms