RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 ZZEF1O43149 2961 aa9.97□□□□□ -0.81
NIF3L1-206ENST00000416651 SPEGQ15772 3267 aa9.96□□□□□ -0.81
NIF3L1-206ENST00000416651 LAMA4Q16363 1823 aa9.96□□□□□ -0.81
NIF3L1-206ENST00000416651 KCNA2P16389 499 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 LAG3P18627 525 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 FAM189BP81408 668 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 DSC3Q14574 896 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 SMC1AQ14683 1233 aaKnown RBP9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 WTAPQ15007 396 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 ACAP1Q15027 740 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 CLLU1OSQ5K130 101 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 XRRA1Q6P2D8 792 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 GPR149Q86SP6 731 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 FAM228AQ86W67 206 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 HOMER1Q86YM7 354 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 PIBF1Q8WXW3 757 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 CDK15Q96Q40 435 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 PIGSQ96S52 555 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 MAP10Q9P2G4 905 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 WNT16Q9UBV4 365 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 ST3GAL5Q9UNP4 418 aa9.96□□□□□ -0.82
NIF3L1-206ENST00000416651 DOCK8Q8NF50 2099 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 CEP295Q9C0D2 2601 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 GCOM1H8Y6P7 765 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 B4GALT3O60512 393 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 KINO60870 393 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 PARP1P09874 1014 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 POLR2MP0CAP2 368 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 KRT76Q01546 638 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 SPEM2Q0P670 501 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 ARID5BQ14865 1188 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 C20orf194Q5TEA3 1177 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 IER5Q5VY09 327 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 USP17L6PQ6QN14 398 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 ENAHQ8N8S7 591 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 GLG1Q92896 1179 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 ITPKCQ96DU7 683 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 ZNF668Q96K58 619 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 ZNF558Q96NG5 402 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 RTKNQ9BST9 563 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 MAF1Q9H063 256 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 SPG21Q9NZD8 308 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 PUF60Q9UHX1 559 aaKnown RBP9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 SIT1Q9Y3P8 196 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 SQORQ9Y6N5 450 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 FRMPD4Q14CM0 1322 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 PATJQ8NI35 1801 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 DOCK6Q96HP0 2047 aa9.95□□□□□ -0.82
NIF3L1-206ENST00000416651 CNOT1A5YKK6 2376 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 EVPLQ92817 2033 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 FSD2A1L4K1 749 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 DENND3A2RUS2 1198 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 B4E1Z4 1266 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 FIBPO43427 364 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 CYTH3O43739 400 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 RPS6KA5O75582 802 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 CD72P21854 359 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 RFX1P22670 979 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 CSTF1Q05048 431 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 ASPRV1Q53RT3 343 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 ZC3H14Q6PJT7 736 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 MTHFD1LQ6UB35 978 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 MFSD6Q6ZSS7 791 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 CCDC149Q6ZUS6 474 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 SLC24A5Q71RS6 500 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 VPS52Q8N1B4 723 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 RNF169Q8NCN4 708 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 SEPT1Q8WYJ6 367 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 OSMRQ99650 979 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 TMEM117Q9H0C3 514 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 ZBP1Q9H171 429 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 ATP6V0A4Q9HBG4 840 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 TMEM161AQ9NX61 479 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 ERAP1Q9NZ08 941 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 MAD2L2Q9UI95 211 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 SMG5Q9UPR3 1016 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 PCDHA2Q9Y5H9 948 aa9.94□□□□□ -0.82
NIF3L1-206ENST00000416651 ASPMQ8IZT6 3477 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 KDM3AQ9Y4C1 1321 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 KLRF2D3W0D1 207 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 ZBTB5O15062 677 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 LILRB3O75022 631 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 ITGB5P18084 799 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 FGFR4P22455 802 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 HOXC13P31276 330 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 GBP2P32456 591 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 BCAR1P56945 870 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 KIZQ2M2Z5 673 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 LETM2Q2VYF4 491 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 GNPTABQ3T906 1256 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 LONRF3Q496Y0 759 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 OTOP3Q7RTS5 596 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 CABP7Q86V35 215 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 DGKHQ86XP1 1220 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 KIAA0319LQ8IZA0 1049 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 PJA1Q8NG27 643 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 HELQQ8TDG4 1101 aa9.93□□□□□ -0.82
NIF3L1-206ENST00000416651 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms