RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ARHGAP10A1A4S6 786 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 IREB2P48200 963 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 KLHL38Q2WGJ6 581 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 NFRKBQ6P4R8 1299 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 KIAA2013Q8IYS2 634 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 C7orf31Q8N865 590 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 GFM2Q969S9 779 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 THOC1Q96FV9 657 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 SERPINI1Q99574 410 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 TAF1DQ9H5J8 278 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 SLC16A3O15427 465 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 NUGGCQ68CJ6 796 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 ZNF564Q8TBZ8 553 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 FAM96AQ9H5X1 160 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 ZWILCHQ9H900 591 aa14.65□□□□□ -0.06
SMARCA4-202ENST00000413806 CFAP73A6NFT4 308 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 GCLMP48507 274 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 IQCB1Q15051 598 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 FBXW10Q5XX13 1052 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 ASNSD1Q9NWL6 643 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 ORC6Q9Y5N6 252 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 NBPF26B4DH59 902 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 RAD23BP54727 409 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 LLGL1Q15334 1064 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 STXBP2Q15833 593 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 BEND6Q5SZJ8 279 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 NBPF15Q8N660 670 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 FAF2Q96CS3 445 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 FAM84BQ96KN1 310 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 PITPNM3Q9BZ71 974 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 ECT2Q9H8V3 914 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 PPP2R2AP63151 447 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 SLC44A5Q8NCS7 719 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 NUDCD1Q96RS6 583 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 STXBP3O00186 592 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 PPP1R12AO14974 1030 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 SYF2O95926 243 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 SRGAP2CP0DJJ0 459 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 ZSCAN20P17040 1043 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 PSMC1P62191 440 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 DRAP1Q14919 205 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 QRICH1Q2TAL8 776 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 RMDN3Q96TC7 470 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 NUP85Q9BW27 656 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 ANGPTL3Q9Y5C1 460 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 FOXN1O15353 648 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 CTIFO43310 598 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 OSTNP61366 133 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 SCARF1Q14162 830 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 TRIM72Q6ZMU5 477 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 TTLL6Q8N841 843 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 HSPH1Q92598 858 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 TTC1Q99614 292 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 TMEM60Q9H2L4 133 aa14.64□□□□□ -0.07
SMARCA4-202ENST00000413806 ABCA9Q8IUA7 1624 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 GMNCA6NCL1 334 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 QARSP47897 775 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 CRLF3Q8IUI8 442 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.63□□□□□ -0.074e-6■■■■■ 29.8
SMARCA4-202ENST00000413806 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.63□□□□□ -0.072e-8■■■□□ 18.8
SMARCA4-202ENST00000413806 CPVLQ9H3G5 476 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 TSC22D4Q9Y3Q8 395 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 CLDN3O15551 220 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 HDLBPQ00341 1268 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 DHX34Q14147 1143 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 NAA30Q147X3 362 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 SBK1Q52WX2 424 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 RFFLQ8WZ73 363 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 DHX38Q92620 1227 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 TRAIPQ9BWF2 469 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 TRIM55Q9BYV6 548 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 NEXMIFQ5QGS0 1516 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 POTEFA5A3E0 1075 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 PDXKO00764 312 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 POTEIP0CG38 1075 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 DPYDQ12882 1025 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 C12orf60Q5U649 245 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 SPOPLQ6IQ16 392 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 POTEGQ6S5H5 508 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 POTEEQ6S8J3 1075 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 SRBD1Q8N5C6 995 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 IP6K2Q9UHH9 426 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 TUBE1Q9UJT0 475 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 CCDC159P0C7I6 412 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 SOX5P35711 763 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 CCZ1BP86790 482 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 CCZ1P86791 482 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 ELOA2Q8IYF1 753 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 ABI1Q8IZP0 508 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 TUFT1Q9NNX1 390 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 CYP26B1Q9NR63 512 aa14.63□□□□□ -0.07
SMARCA4-202ENST00000413806 PP2D1A8MPX8 630 aa14.62□□□□□ -0.07
SMARCA4-202ENST00000413806 SNAP23O00161 211 aa14.62□□□□□ -0.07
SMARCA4-202ENST00000413806 COPEO14579 308 aa14.62□□□□□ -0.07
SMARCA4-202ENST00000413806 GYG2O15488 501 aa14.62□□□□□ -0.07
SMARCA4-202ENST00000413806 NCK2O43639 380 aa14.62□□□□□ -0.07
SMARCA4-202ENST00000413806 ECE2O60344 883 aa14.62□□□□□ -0.07
SMARCA4-202ENST00000413806 SYT2Q8N9I0 419 aaPredicted RBP14.62□□□□□ -0.07
SMARCA4-202ENST00000413806 IGDCC4Q8TDY8 1250 aa14.62□□□□□ -0.07
SMARCA4-202ENST00000413806 NSUN6Q8TEA1 469 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms