RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 FAN1Q9Y2M0 1017 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 IL18RAPO95256 599 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 SKIP12755 728 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 GCLMP48507 274 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 KPNA2P52292 529 aaKnown RBP18■□□□□ 0.47
PCDHA13-202ENST00000409494 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 EHD2Q9NZN4 543 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 PPP1R9AQ9ULJ8 1098 aa18■□□□□ 0.47
PCDHA13-202ENST00000409494 DYNC1LI2O43237 492 aaPredicted RBP17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 KPNA6O60684 536 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 ASPHQ12797 758 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 SLC38A7Q9NVC3 462 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 ADAMTS1Q9UHI8 967 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 MAD2L2Q9UI95 211 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 ATP1A2P50993 1020 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 SLMAPQ14BN4 828 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 IQCB1Q15051 598 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 P4HA2O15460 535 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 TROVE2P10155 538 aaKnown RBP eCLIP17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 PPARGP37231 505 aaPredicted RBP17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 GUCY2DQ02846 1103 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 EP400NLQ6ZTU2 488 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 SPATS2Q86XZ4 545 aaKnown RBP17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 PPP4R1Q8TF05 950 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 RSRC1Q96IZ7 334 aaKnown RBP17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 BCAP29Q9UHQ4 241 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 NKRFO15226 690 aaKnown RBP eCLIP17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 SH3BP5O60239 455 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 NAA30Q147X3 362 aaPredicted RBP17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 KAZNQ674X7 775 aa17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 USP50Q70EL3 339 aaPredicted RBP17.99■□□□□ 0.47
PCDHA13-202ENST00000409494 SGK1O00141 431 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 TJP3O95049 919 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 PPARDQ03181 441 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 HINFPQ9BQA5 517 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 SYNGAP1Q96PV0 1343 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 CD4P01730 458 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 RBP5P82980 135 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 SEPT10Q9P0V9 454 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 NOC2LQ9Y3T9 749 aaKnown RBP17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 KLRK1P26718 216 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 PSMC4P43686 418 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 EPHB4P54760 987 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 LRRC31Q6UY01 552 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 TRIM42Q8IWZ5 723 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 INTS2Q9H0H0 1204 aaKnown RBP17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 SYNJ2BP-COX16A0A087WUM0 186 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 LRRD1A4D1F6 860 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 CIB2O75838 187 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 ARPP19P56211 112 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 RPS6P62753 249 aaKnown RBP17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 GLE1Q53GS7 698 aaKnown RBP17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 ARHGEF18Q6ZSZ5 1173 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 PLEKHH3Q7Z736 793 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 COX16Q9P0S2 106 aa17.98■□□□□ 0.47
PCDHA13-202ENST00000409494 MANSC4A6NHS7 340 aaPredicted RBP17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 C6orf222P0C671 652 aaPredicted RBP17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 ANKS1AQ92625 1134 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 CALN1Q9BXU9 219 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 CNOT8Q9UFF9 292 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 PODXLO00592 558 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 NPM3O75607 178 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 PSMA2P25787 234 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 STX2P32856 288 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 SCARA5Q6ZMJ2 495 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 RNF180Q86T96 592 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 WDR35Q9P2L0 1181 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 IGSF9BQ9UPX0 1349 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 ZMYND10O75800 440 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 KRT7P08729 469 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 CCDC62Q6P9F0 684 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 CCNYQ8ND76 341 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 DNERQ8NFT8 737 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 MICAL1Q8TDZ2 1067 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 PPP1R16BQ96T49 567 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 STRNO43815 780 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 HEXIM1O94992 359 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 CASP8Q14790 479 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 VEPH1Q14D04 833 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 LIMA1Q9UHB6 759 aaKnown RBP17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 MID2Q9UJV3 735 aa17.97■□□□□ 0.47
PCDHA13-202ENST00000409494 SALL3Q9BXA9 1300 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 ZNF484Q5JVG2 852 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 DACT2Q5SW24 774 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 TADA2BQ86TJ2 420 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 ADSSL1Q8N142 457 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 ABHD10Q9NUJ1 306 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 RGL1Q9NZL6 768 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 INPP5FQ9Y2H2 1132 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 ZRANB2O95218 330 aaKnown RBP eCLIP17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 EMC2Q15006 297 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 TMEM270Q6UE05 265 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 RIOX1Q9H6W3 641 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 ABCB6Q9NP58 842 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 GOLGA8QA0A0J9YX86 632 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 GOLGA8OA6NCC3 632 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 GOLGA8NF8WBI6 632 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 SREBF1P36956 1147 aa17.96■□□□□ 0.47
PCDHA13-202ENST00000409494 DDR1Q08345 913 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms