RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 KIAA1024Q9UPX6 916 aa9.31□□□□□ -0.92
BRCC3-205ENST00000399026 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 COL4A6Q14031 1691 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 ARHGEF35A5YM69 484 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 E9PMD0 336 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 TNFRSF10AO00220 468 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 CSDE1O75534 798 aaKnown RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 BAIAP3O94812 1187 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 PARNO95453 639 aaKnown RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 BRD1O95696 1058 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 RPLP2P05387 115 aaKnown RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 TMOD1P28289 359 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 RFC5P40937 340 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 KCNJ6P48051 423 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 RPIAP49247 311 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 NASPP49321 788 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 RABGGTBP53611 331 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 GRB10Q13322 594 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 STK38Q15208 465 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 LRIT3Q3SXY7 679 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 ARL6IP4Q66PJ3 421 aaKnown RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 FAM117BQ6P1L5 589 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 OTUD6AQ7L8S5 288 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 CABP7Q86V35 215 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 FAM228AQ86W67 206 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 NME8Q8N427 588 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 RASSF8Q8NHQ8 419 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 ASAP3Q8TDY4 903 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 LRRC15Q8TF66 581 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 SEPT8Q92599 483 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 PNMA5Q96PV4 448 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 POLR3FQ9H1D9 316 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 BHMT2Q9H2M3 363 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 ADAMTS10Q9H324 1103 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 GPRC5CQ9NQ84 441 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 ANKEF1Q9NU02 776 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 SUCLA2Q9P2R7 463 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 TFIP11Q9UBB9 837 aaKnown RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 ZDHHC9Q9Y397 364 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 NOC2LQ9Y3T9 749 aaKnown RBP9.3□□□□□ -0.92
BRCC3-205ENST00000399026 COL4A3BPQ9Y5P4 624 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 SLC4A7Q9Y6M7 1214 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 KIAA1671Q9BY89 1806 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 KDM3AQ9Y4C1 1321 aa9.3□□□□□ -0.92
BRCC3-205ENST00000399026 A0A087WZ62 844 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 HOXA2O43364 376 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 RPS6KA5O75582 802 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 DGAT1O75907 488 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 MYOGP15173 224 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 ATP2A2P16615 1042 aaKnown RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 DNM2P50570 870 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 DNM1Q05193 864 aaKnown RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 NFX1Q12986 1120 aaKnown RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 PDIA5Q14554 519 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 KARSQ15046 597 aaKnown RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 TMEM119Q4V9L6 283 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 MYOCDQ8IZQ8 938 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 APBB2Q92870 758 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 CDK5RAP3Q96JB5 506 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 ZNF396Q96N95 335 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 NACC1Q96RE7 527 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 JPH2Q9BR39 696 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 FDXACB1Q9BRP7 624 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 RUSC1Q9BVN2 902 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 PBX4Q9BYU1 374 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 CSRNP2Q9H175 543 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 TMX1Q9H3N1 280 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 POLD4Q9HCU8 107 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 ERVK-5Q9HDB9 667 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 DBR1Q9UK59 544 aaKnown RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 PADI3Q9ULW8 664 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 YBX2Q9Y2T7 364 aaKnown RBP9.29□□□□□ -0.92
BRCC3-205ENST00000399026 PPME1Q9Y570 386 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 CHD9Q3L8U1 2897 aa9.29□□□□□ -0.92
BRCC3-205ENST00000399026 NLRC5Q86WI3 1866 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 MGEA5O60502 916 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 SSBP05455 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
BRCC3-205ENST00000399026 PLCG1P19174 1290 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 NCLP19338 710 aaKnown RBP9.28□□□□□ -0.92
BRCC3-205ENST00000399026 LONP1P36776 959 aaKnown RBP9.28□□□□□ -0.92
BRCC3-205ENST00000399026 CRYBB1P53674 252 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-205ENST00000399026 RAD51AP2Q09MP3 1159 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 LAMTOR4Q0VGL1 99 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 CAPSQ13938 189 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 IKBKEQ14164 716 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 SLC39A14Q15043 492 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 FAM102BQ5T8I3 360 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 USP49Q70CQ1 688 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 Q7L0L9 218 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 LINC00301Q8NCQ3 95 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 TCP11Q8WWU5 503 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 PRPF31Q8WWY3 499 aaKnown RBP9.28□□□□□ -0.92
BRCC3-205ENST00000399026 PSPC1Q8WXF1 523 aaKnown RBP9.28□□□□□ -0.92
BRCC3-205ENST00000399026 BSNDQ8WZ55 320 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 EPSTI1Q96J88 318 aa9.28□□□□□ -0.92
BRCC3-205ENST00000399026 SLC9A7Q96T83 725 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms