RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 RNF207Q6ZRF8 634 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 ATG4CQ96DT6 458 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 PPP1R9AQ9ULJ8 1098 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 SORBS3O60504 671 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 EPHB4P54760 987 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 PPP3CAQ08209 521 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 FAM102BQ5T8I3 360 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 ARHGEF16Q5VV41 709 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 HAUS6Q7Z4H7 955 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 PALB2Q86YC2 1186 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 BCAS4Q8TDM0 211 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 ZKSCAN4Q969J2 545 aaPredicted RBP25.78■■□□□ 1.72
PABPN1-202ENST00000397276 KIFC3Q9BVG8 833 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 UBE2TQ9NPD8 197 aaPredicted RBP25.78■■□□□ 1.72
PABPN1-202ENST00000397276 TAS2R14Q9NYV8 317 aa25.78■■□□□ 1.72
PABPN1-202ENST00000397276 PLS3P13797 630 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 NENFQ9UMX5 172 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 CCNE2O96020 404 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 FAM153BP0C7A2 387 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 SP4Q02446 784 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 FAM153CQ494X1 144 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 XKR9Q5GH70 373 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 MICALL2Q8IY33 904 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 METTL13Q8N6R0 699 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 ARL8AQ96BM9 186 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 VPS33BQ9H267 617 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 FAM153AQ9UHL3 310 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 HACL1Q9UJ83 578 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 FAM169AQ9Y6X4 670 aa25.77■■□□□ 1.72
PABPN1-202ENST00000397276 GUCY2FP51841 1108 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 SF3B2Q13435 895 aaKnown RBP25.76■■□□□ 1.71
PABPN1-202ENST00000397276 TNFAIP1Q13829 316 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 DALRD3Q5D0E6 543 aaKnown RBP25.76■■□□□ 1.71
PABPN1-202ENST00000397276 IFT20Q8IY31 132 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 ACCSQ96QU6 501 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 PDCD2LQ9BRP1 358 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 A0A087WUV0 522 aaPredicted RBP25.76■■□□□ 1.71
PABPN1-202ENST00000397276 RAD51CO43502 376 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 ZBED4O75132 1171 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 VAMP7P51809 220 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 SOX10P56693 466 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 GNGT1P63211 74 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 BAATQ14032 418 aaPredicted RBP25.76■■□□□ 1.71
PABPN1-202ENST00000397276 GLE1Q53GS7 698 aaKnown RBP25.76■■□□□ 1.71
PABPN1-202ENST00000397276 SLC30A5Q8TAD4 765 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 OLIG1Q8TAK6 271 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 CAPS2Q9BXY5 557 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 TMEM206Q9H813 350 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 TBC1D22BQ9NU19 505 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 HSPBP1Q9NZL4 362 aa25.76■■□□□ 1.71
PABPN1-202ENST00000397276 GRIN2DO15399 1336 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 KIF13BQ9NQT8 1826 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 CCDC169A6NNP5 214 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 CTNND1O60716 968 aaKnown RBP25.75■■□□□ 1.71
PABPN1-202ENST00000397276 USP8P40818 1118 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 SLC35G2Q8TBE7 412 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 PXMP2Q9NR77 195 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 MYH11P35749 1972 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 IGSF9BQ9UPX0 1349 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 TNFAIP3P21580 790 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 FBXW10Q5XX13 1052 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 NIPA1Q7RTP0 329 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 SLC9A9Q8IVB4 645 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 ARHGEF19Q8IW93 802 aa25.75■■□□□ 1.71
PABPN1-202ENST00000397276 DBR1Q9UK59 544 aaKnown RBP25.75■■□□□ 1.71
PABPN1-202ENST00000397276 LMO3Q8TAP4 145 aa25.74■■□□□ 1.71
PABPN1-202ENST00000397276 PLEKHO2Q8TD55 490 aa25.74■■□□□ 1.71
PABPN1-202ENST00000397276 SLC20A1Q8WUM9 679 aa25.74■■□□□ 1.71
PABPN1-202ENST00000397276 CASKIN2Q8WXE0 1202 aa25.74■■□□□ 1.71
PABPN1-202ENST00000397276 ELMO3Q96BJ8 720 aa25.74■■□□□ 1.71
PABPN1-202ENST00000397276 VWA5AO00534 786 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 LMNB1P20700 586 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 GMPSP49915 693 aaPredicted RBP25.73■■□□□ 1.71
PABPN1-202ENST00000397276 INTS8Q75QN2 995 aaKnown RBP25.73■■□□□ 1.71
PABPN1-202ENST00000397276 KAT5Q92993 513 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 GDF3Q9NR23 364 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 TELO2Q9Y4R8 837 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 NFKBIEO00221 500 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 BUB1BO60566 1050 aaPredicted RBP25.73■■□□□ 1.71
PABPN1-202ENST00000397276 BAG6P46379 1132 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 EMBQ6PCB8 327 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 XXYLT1Q8NBI6 393 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 CTNNBL1Q8WYA6 563 aaPredicted RBP25.73■■□□□ 1.71
PABPN1-202ENST00000397276 ARHGEF26Q96DR7 871 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 SAAL1Q96ER3 474 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 THAP2Q9H0W7 228 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 RNF146Q9NTX7 359 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 CHORDC1Q9UHD1 332 aaPredicted RBP25.73■■□□□ 1.71
PABPN1-202ENST00000397276 EBAG9O00559 213 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 ERLIN2O94905 339 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 CPP00450 1065 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 TNNC1P63316 161 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 SH2D3CQ8N5H7 860 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 LMBR1Q8WVP7 490 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 CCDC127Q96BQ5 260 aa25.73■■□□□ 1.71
PABPN1-202ENST00000397276 PSMC5P62195 406 aa25.72■■□□□ 1.71
PABPN1-202ENST00000397276 PPFIA1Q13136 1202 aa25.72■■□□□ 1.71
PABPN1-202ENST00000397276 TTMPQ5BVD1 217 aa25.72■■□□□ 1.71
PABPN1-202ENST00000397276 KCTD16Q68DU8 428 aa25.72■■□□□ 1.71
PABPN1-202ENST00000397276 RUBCNQ92622 972 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms