RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 LRRIQ4A6NIV6 560 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 PP2D1A8MPX8 630 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 LAG3P18627 525 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 PCBP1Q15365 356 aaKnown RBP eCLIP19.41■□□□□ 0.7
UPK3A-202ENST00000396082 ZRSR1Q15695 479 aaKnown RBP19.41■□□□□ 0.7
UPK3A-202ENST00000396082 LONRF3Q496Y0 759 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 CLLU1OSQ5K130 101 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 ZNF598Q86UK7 904 aaKnown RBP19.41■□□□□ 0.7
UPK3A-202ENST00000396082 THNSL1Q8IYQ7 743 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 CASD1Q96PB1 797 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 TRAIPQ9BWF2 469 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 MRPL9Q9BYD2 267 aaKnown RBP19.41■□□□□ 0.7
UPK3A-202ENST00000396082 BHMT2Q9H2M3 363 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 RNF19AQ9NV58 838 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 HCSTQ9UBK5 93 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 PLAGL2Q9UPG8 496 aa19.41■□□□□ 0.7
UPK3A-202ENST00000396082 VWA3AA6NCI4 1184 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 ITGB1P05556 798 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 ATF7P17544 494 aaPredicted RBP19.4■□□□□ 0.7
UPK3A-202ENST00000396082 TFF2Q03403 129 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 POU5F1BQ06416 359 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 IL17AQ16552 155 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 ECM1Q16610 540 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 CSPP1Q1MSJ5 1256 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 COLGALT1Q8NBJ5 622 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 SYMPKQ92797 1274 aaKnown RBP19.4■□□□□ 0.7
UPK3A-202ENST00000396082 LPPQ93052 612 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 PGBD4Q96DM1 585 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 INTS4Q96HW7 963 aaKnown RBP19.4■□□□□ 0.7
UPK3A-202ENST00000396082 ASB2Q96Q27 587 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 PCDHB2Q9Y5E7 798 aa19.4■□□□□ 0.7
UPK3A-202ENST00000396082 TSPAN1O60635 241 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 CYP11B2P19099 503 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 CDC25AP30304 524 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 TCEAL5Q5H9L2 206 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 ARL6IP4Q66PJ3 421 aaKnown RBP19.39■□□□□ 0.69
UPK3A-202ENST00000396082 NOTUMQ6P988 496 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 GLB1LQ6UWU2 654 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 EP400NLQ6ZTU2 488 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 IFNLR1Q8IU57 520 aaPredicted RBP19.39■□□□□ 0.69
UPK3A-202ENST00000396082 ZBTB8OSQ8IWT0 167 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 CDK5RAP3Q96JB5 506 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 COL25A1Q9BXS0 654 aaPredicted RBP19.39■□□□□ 0.69
UPK3A-202ENST00000396082 CWH43Q9H720 699 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 DNM3Q9UQ16 869 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 INPP5FQ9Y2H2 1132 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 PLXNA4Q9HCM2 1894 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 ATG2AQ2TAZ0 1938 aa19.39■□□□□ 0.69
UPK3A-202ENST00000396082 ZNF623O75123 536 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 BMP15O95972 392 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 AXLP30530 894 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 MBTD1Q05BQ5 628 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 HSCBQ8IWL3 235 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 SPPL3Q8TCT6 385 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 POF1BQ8WVV4 589 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 RSPH1Q8WYR4 309 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 PPP2R3CQ969Q6 453 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 CPB2Q96IY4 423 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 ZNF558Q96NG5 402 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 NFKBIZQ9BYH8 718 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 PRUNE2Q8WUY3 3088 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 TRANK1O15050 2925 aa19.38■□□□□ 0.69
UPK3A-202ENST00000396082 E9PMD0 336 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 FGF18O76093 207 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 SYT1P21579 422 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 HOXA11P31270 313 aaPredicted RBP19.37■□□□□ 0.69
UPK3A-202ENST00000396082 PPP2R5AQ15172 486 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 TMEM132AQ24JP5 1023 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 LRRC55Q6ZSA7 311 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 DEPTORQ8TB45 409 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 URGCPQ8TCY9 931 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 CCDC51Q96ER9 411 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 IFT74Q96LB3 600 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 TRIM6Q9C030 488 aaPredicted RBP19.37■□□□□ 0.69
UPK3A-202ENST00000396082 C2orf40Q9H1Z8 148 aa19.37■□□□□ 0.69
UPK3A-202ENST00000396082 UBE2ZQ9H832 354 aaPredicted RBP19.37■□□□□ 0.69
UPK3A-202ENST00000396082 MEIS3P2A8K0S8 358 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 EYA4O95677 639 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 HSP90AA1P07900 732 aaKnown RBP19.36■□□□□ 0.69
UPK3A-202ENST00000396082 PPM1AP35813 382 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 UBE3AQ05086 875 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 RNASELQ05823 741 aaKnown RBP19.36■□□□□ 0.69
UPK3A-202ENST00000396082 KCNT2Q6UVM3 1135 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 CNNM3Q8NE01 707 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 MICAL1Q8TDZ2 1067 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 KIFAP3Q92845 792 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 MMTAG2Q9BU76 263 aaKnown RBP19.36■□□□□ 0.69
UPK3A-202ENST00000396082 NT5C3AQ9H0P0 336 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 PRMT7Q9NVM4 692 aaPredicted RBP19.36■□□□□ 0.69
UPK3A-202ENST00000396082 MYO7AQ13402 2215 aa19.36■□□□□ 0.69
UPK3A-202ENST00000396082 CNTNAP2Q9UHC6 1331 aa19.35■□□□□ 0.69
UPK3A-202ENST00000396082 ZC3H11AO75152 810 aaKnown RBP eCLIP19.35■□□□□ 0.69
UPK3A-202ENST00000396082 SSBP05455 408 aaKnown RBP eCLIP19.35■□□□□ 0.69
UPK3A-202ENST00000396082 ARF4P18085 180 aaPredicted RBP19.35■□□□□ 0.69
UPK3A-202ENST00000396082 LIG1P18858 919 aa19.35■□□□□ 0.69
UPK3A-202ENST00000396082 KCNA5P22460 613 aa19.35■□□□□ 0.69
UPK3A-202ENST00000396082 DNAJB1P25685 340 aa19.35■□□□□ 0.69
UPK3A-202ENST00000396082 PBX3P40426 434 aa19.35■□□□□ 0.69
UPK3A-202ENST00000396082 NAMPTP43490 491 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms