RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 TATDN2Q93075 761 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 KLHL29Q96CT2 875 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 RAB17Q9H0T7 212 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 KDM3AQ9Y4C1 1321 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 TOGARAM1Q9Y4F4 1720 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 DDTLA6NHG4 134 aaPredicted RBP18.05■□□□□ 0.48
SIPA1-201ENST00000394224 POC1B-GALNT4F8VUJ3 575 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 GOLGA8SH3BPF8 625 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 GOLGA8MH3BSY2 632 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 FMO5P49326 533 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 ICA1Q05084 483 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 MTMR3Q13615 1198 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 ARHGEF19Q8IW93 802 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 ACTRT1Q8TDG2 376 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 INTS2Q9H0H0 1204 aaKnown RBP18.05■□□□□ 0.48
SIPA1-201ENST00000394224 TGFB1I1O43294 461 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 CALCOCO2Q13137 446 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 ZNF572Q7Z3I7 529 aaPredicted RBP18.04■□□□□ 0.48
SIPA1-201ENST00000394224 ZDHHC14Q8IZN3 488 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 SPOCK2Q92563 424 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 CCT8L1PA6NM43 557 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 F5H6K3 240 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 PSMC2P35998 433 aaKnown RBP18.04■□□□□ 0.48
SIPA1-201ENST00000394224 ECE1P42892 770 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 KLRC3Q07444 240 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 HOOK3Q86VS8 718 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 SYCE1Q8N0S2 351 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 ARHGEF2Q92974 986 aaKnown RBP18.04■□□□□ 0.48
SIPA1-201ENST00000394224 CBWD1Q9BRT8 395 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 SIX2Q9NPC8 291 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 TOPORSQ9NS56 1045 aaPredicted RBP18.04■□□□□ 0.48
SIPA1-201ENST00000394224 SNED1Q8TER0 1413 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 CCDC169A6NNP5 214 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 IGF2BP3O00425 579 aaKnown RBP eCLIP18.04■□□□□ 0.48
SIPA1-201ENST00000394224 RASSF9O75901 435 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 GH2P01242 217 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 BIRC3Q13489 604 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 RINT1Q6NUQ1 792 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 FBXO11Q86XK2 927 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 TBC1D16Q8TBP0 767 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 ATP8B4Q8TF62 1192 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 TMEM237Q96Q45 408 aa18.04■□□□□ 0.48
SIPA1-201ENST00000394224 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
SIPA1-201ENST00000394224 TMEM120BA0PK00 339 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 CLRN2A0PK11 232 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 ENO4A6NNW6 628 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 SHMT1P34896 483 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 PRR5LQ6MZQ0 368 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 GSTA5Q7RTV2 222 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 RPAINQ86UA6 219 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 SLC47A2Q86VL8 602 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 RFFLQ8WZ73 363 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 IQCDQ96DY2 449 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 FAM114A2Q9NRY5 505 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.03■□□□□ 0.48
SIPA1-201ENST00000394224 A0A1W2PRG0 241 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 GAS7O60861 476 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 ELF3P78545 371 aaPredicted RBP18.03■□□□□ 0.48
SIPA1-201ENST00000394224 SEL1L2Q5TEA6 688 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 MIGA2Q7L4E1 593 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 ZNF653Q96CK0 615 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 ECT2Q9H8V3 914 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 SPATA31A1Q5TZJ5 1347 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 MEIS2O14770 477 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 LGR5O75473 907 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 ADCY8P40145 1251 aa18.03■□□□□ 0.48
SIPA1-201ENST00000394224 MTRF1LQ9UGC7 380 aaKnown RBP18.03■□□□□ 0.48
SIPA1-201ENST00000394224 CASZ1Q86V15 1759 aa18.02■□□□□ 0.48
SIPA1-201ENST00000394224 HARSP12081 509 aaKnown RBP18.02■□□□□ 0.48
SIPA1-201ENST00000394224 CHKAP35790 457 aa18.02■□□□□ 0.48
SIPA1-201ENST00000394224 CDC42EP5Q6NZY7 148 aa18.02■□□□□ 0.48
SIPA1-201ENST00000394224 TYW1Q9NV66 732 aaKnown RBP18.02■□□□□ 0.48
SIPA1-201ENST00000394224 FERP16591 822 aa18.02■□□□□ 0.48
SIPA1-201ENST00000394224 PPP4CP60510 307 aa18.02■□□□□ 0.48
SIPA1-201ENST00000394224 SMAD1Q15797 465 aaKnown RBP18.02■□□□□ 0.48
SIPA1-201ENST00000394224 PRELID2Q8N945 189 aa18.02■□□□□ 0.48
SIPA1-201ENST00000394224 C12orf65Q9H3J6 166 aaKnown RBP18.02■□□□□ 0.48
SIPA1-201ENST00000394224 DNAJC5Q9H3Z4 198 aa18.02■□□□□ 0.48
SIPA1-201ENST00000394224 TMEM59LQ9UK28 342 aa18.02■□□□□ 0.48
SIPA1-201ENST00000394224 PI4K2BG5E9Z4 385 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 CCDC188H7C350 402 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 PDHA1P08559 390 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 C6orf89Q6UWU4 347 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 TRPM8Q7Z2W7 1104 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 AGAP11Q8TF27 550 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 PABPC3Q9H361 631 aaKnown RBP18.02■□□□□ 0.47
SIPA1-201ENST00000394224 C10orf88Q9H8K7 445 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 FBXO28Q9NVF7 368 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 WRAP73Q9P2S5 460 aaPredicted RBP18.02■□□□□ 0.47
SIPA1-201ENST00000394224 INTUQ9ULD6 942 aa18.02■□□□□ 0.47
SIPA1-201ENST00000394224 ANP32DO95626 131 aa18.01■□□□□ 0.47
SIPA1-201ENST00000394224 ATP6V1G2O95670 118 aa18.01■□□□□ 0.47
SIPA1-201ENST00000394224 SERPINB2P05120 415 aa18.01■□□□□ 0.47
SIPA1-201ENST00000394224 STX2P32856 288 aa18.01■□□□□ 0.47
SIPA1-201ENST00000394224 MREGQ8N565 214 aa18.01■□□□□ 0.47
SIPA1-201ENST00000394224 TDRD3Q9H7E2 651 aaKnown RBP18.01■□□□□ 0.47
SIPA1-201ENST00000394224 PARVGQ9HBI0 331 aa18.01■□□□□ 0.47
SIPA1-201ENST00000394224 RASAL2Q9UJF2 1139 aa18.01■□□□□ 0.47
SIPA1-201ENST00000394224 THAP12O43422 761 aa18.01■□□□□ 0.47
SIPA1-201ENST00000394224 RPS6KA4O75676 772 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms