RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 LMBR1LQ6UX01 489 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 B3GNT9Q6UX72 402 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 CATIPQ7Z7H3 387 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 IFNL2Q8IZJ0 200 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 GLB1L3Q8NCI6 653 aaPredicted RBP4.07□□□□□ -1.76
PTPRC-205ENST00000391970 NUDT10Q8NFP7 164 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 NUDT11Q96G61 164 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 PAWRQ96IZ0 340 aaKnown RBP4.07□□□□□ -1.76
PTPRC-205ENST00000391970 FAM84AQ96KN4 292 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 YTHDC1Q96MU7 727 aaKnown RBP4.07□□□□□ -1.76
PTPRC-205ENST00000391970 WDR92Q96MX6 357 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 PWWP2AQ96N64 755 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 PCGF6Q9BYE7 350 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 GTPBP4Q9BZE4 634 aaKnown RBP4.07□□□□□ -1.76
PTPRC-205ENST00000391970 GREM2Q9H772 168 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 DMRT3Q9NQL9 472 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 OBP2AQ9NY56 170 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 CDC42EP3Q9UKI2 254 aa4.07□□□□□ -1.76
PTPRC-205ENST00000391970 CCDC194A0A1B0GVG4 234 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 A0A1W2PR48 441 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 SH3D21A4FU49 640 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 DDX3XO00571 662 aaKnown RBP eCLIP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 HTRA2O43464 458 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 OFD1O75665 1012 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 FARP2O94887 1054 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 LY86O95711 162 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 HMGCRP04035 888 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 GAAP10253 952 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 WASP42768 502 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 KCNQ1P51787 676 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 MEF2AQ02078 507 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 CD69Q07108 199 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 PPP3CAQ08209 521 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 HLTFQ14527 1009 aaKnown RBP eCLIP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 ZNF267Q14586 743 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 MAN2A1Q16706 1144 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 TRIM68Q6AZZ1 485 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 ATG14Q6ZNE5 492 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 USP45Q70EL2 814 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 DGKHQ86XP1 1220 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 REXO1L1PQ8IX06 675 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 CCDC146Q8IYE0 955 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 UNC5BQ8IZJ1 945 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 ZNF526Q8TF50 670 aaPredicted RBP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 NRG4Q8WWG1 115 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 HPS3Q969F9 1004 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 RUNDC1Q96C34 613 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 TAAR9Q96RI9 348 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 PPP1R16BQ96T49 567 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 KATNBL1Q9H079 304 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 L2HGDHQ9H9P8 463 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 CD320Q9NPF0 282 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 PRDM11Q9NQV5 511 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 NTMQ9P121 344 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 SAP30BPQ9UHR5 308 aaKnown RBP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 CNOT6Q9ULM6 557 aaKnown RBP4.06□□□□□ -1.76
PTPRC-205ENST00000391970 LIMCH1Q9UPQ0 1083 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 VWA7Q9Y334 891 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 IPPQ9Y573 584 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 KCTD3Q9Y597 815 aa4.06□□□□□ -1.76
PTPRC-205ENST00000391970 TCAF2A6NFQ2 919 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 CCDC154A6NI56 674 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 RFXAPO00287 272 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 AP1G1O43747 822 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 DTNBO60941 627 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 CAND2O75155 1236 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 FSBPO95073 299 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 HNRNPLP14866 589 aaKnown RBP eCLIP4.05□□□□□ -1.76
PTPRC-205ENST00000391970 PDCP20941 246 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 EDNRBP24530 442 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 FXR1P51114 621 aaKnown RBP eCLIP4.05□□□□□ -1.76
PTPRC-205ENST00000391970 SESN2P58004 480 aaPredicted RBP4.05□□□□□ -1.76
PTPRC-205ENST00000391970 MGAT2Q10469 447 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 GBX1Q14549 363 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 ZNF827Q17R98 1081 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 KLHDC10Q6PID8 442 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 Q6ZUG5 572 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 LARP4Q71RC2 724 aaKnown RBP eCLIP4.05□□□□□ -1.76
PTPRC-205ENST00000391970 PRR18Q8N4B5 295 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 PIK3C3Q8NEB9 887 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 SLC35G2Q8TBE7 412 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 DIS3LQ8TF46 1054 aaKnown RBP4.05□□□□□ -1.76
PTPRC-205ENST00000391970 DACT3Q96B18 629 aaPredicted RBP4.05□□□□□ -1.76
PTPRC-205ENST00000391970 AJUBAQ96IF1 538 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 SPATA25Q9BR10 227 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 ADI1Q9BV57 179 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 RBM12Q9NTZ6 932 aaKnown RBP4.05□□□□□ -1.76
PTPRC-205ENST00000391970 SLC52A1Q9NWF4 448 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 RCAN3Q9UKA8 241 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 SMG5Q9UPR3 1016 aaKnown RBP4.05□□□□□ -1.76
PTPRC-205ENST00000391970 DNM3Q9UQ16 869 aa4.05□□□□□ -1.76
PTPRC-205ENST00000391970 FFAR3O14843 346 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 TSPAN15O95858 294 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 LTA4HP09960 611 aaKnown RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 C1QTNF9P0C862 333 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 GSPT1P15170 499 aaKnown RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 CTSSP25774 331 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 CSF2RBP32927 897 aa4.04□□□□□ -1.76
PTPRC-205ENST00000391970 SARSP49591 514 aaKnown RBP4.04□□□□□ -1.76
PTPRC-205ENST00000391970 LINC00310P59036 64 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms