RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 HBP1O60381 514 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 KRT15P19012 456 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 C10orf76Q5T2E6 689 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 GLYCTKQ8IVS8 523 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 NSRP1Q9H0G5 558 aaKnown RBP14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 PXMP2Q9NR77 195 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 ANKEF1Q9NU02 776 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 ZBBXA8MT70 800 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 KRT1P04264 644 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 HAUS1Q96CS2 278 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 SYT17Q9BSW7 474 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 ANAPC7Q9UJX3 599 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 PITPNM2Q9BZ72 1349 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 YDJCA8MPS7 323 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 OATP04181 439 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 SSTR3P32745 418 aaPredicted RBP14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 SNRNP35Q16560 246 aaKnown RBP14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 MOXD1Q6UVY6 613 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 SCN4BQ8IWT1 228 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 ACAP3Q96P50 834 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 SLIT2O94813 1529 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 ITIH3Q06033 890 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 DGKDQ16760 1214 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 USP50Q70EL3 339 aaPredicted RBP14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 CCNYQ8ND76 341 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 GRK7Q8WTQ7 553 aa14.09□□□□□ -0.15
PTPRN2-202ENST00000389416 PGRMC1O00264 195 aaKnown RBP14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 IRF6O14896 467 aa14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 ACTN1P12814 892 aa14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 ELF1P32519 619 aa14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 CNTN2Q02246 1040 aa14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 SLC51AQ86UW1 340 aa14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 LIMA1Q9UHB6 759 aaKnown RBP14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 RSPH14Q9UHP6 348 aa14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 COL14A1Q05707 1796 aaKnown RBP14.08□□□□□ -0.15
PTPRN2-202ENST00000389416 SGO2Q562F6 1265 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 EFCC1Q9HA90 598 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 A0A1W2PQC6 194 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 NDC80O14777 642 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 NLRP11P59045 1033 aaKnown RBP14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 MTF1Q14872 753 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 SHROOM1Q2M3G4 852 aaPredicted RBP14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 DENND2CQ68D51 928 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 PPP1R2P3Q6NXS1 205 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 RUFY4Q6ZNE9 571 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 PRPSAP2O60256 369 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 RFC5P40937 340 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 PALM2Q8IXS6 379 aa14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 MAP3K20Q9NYL2 800 aaKnown RBP14.08□□□□□ -0.16
PTPRN2-202ENST00000389416 GOLGA6CA6NDK9 693 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 SGK1O00141 431 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 GOLGA6DP0CG33 693 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 GNA15P30679 374 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 CTNNA1P35221 906 aaKnown RBP14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 RHOT2Q8IXI1 618 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 RNF139Q8WU17 664 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 KATNAL1Q9BW62 490 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 RABEP2Q9H5N1 569 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 PRDM5Q9NQX1 630 aaPredicted RBP14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 CYP26B1Q9NR63 512 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 GOLGA6AQ9NYA3 693 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 HPSEQ9Y251 543 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 VIMP08670 466 aaKnown RBP14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 ATF2P15336 505 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 TBXAS1P24557 533 aaPredicted RBP14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 FCGRTP55899 365 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 EDRF1Q3B7T1 1238 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 A0A1B0GTH6 734 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 ARL4AP40617 200 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 CLCN3P51790 818 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 MUM1L1Q5H9M0 696 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 IER5Q5VY09 327 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 RDM1Q8NG50 284 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 MKL1Q969V6 931 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 CHP1Q99653 195 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 ZWILCHQ9H900 591 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 AGPAT5Q9NUQ2 364 aa14.07□□□□□ -0.16
PTPRN2-202ENST00000389416 A8MXQ7 604 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PALMO75781 387 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 FTLP02792 175 aaPredicted RBP14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PSMA2P25787 234 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 ATP5DP30049 168 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 RGS2P41220 211 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PPATQ06203 517 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PCNX4Q63HM2 1172 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 KCTD6Q8NC69 237 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 POLIQ9UNA4 740 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PPP1R3GB7ZBB8 358 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 CYP26A1O43174 497 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 SLC9A1P19634 815 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 FMO5P49326 533 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 MRPS25P82663 173 aaKnown RBP14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 DGKZQ13574 1117 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 BRD3Q15059 726 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PPP6R3Q5H9R7 873 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms