RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PPP1R9AQ9ULJ8 1098 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 TFR2Q9UP52 801 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 GYPCP04921 128 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 UCHL3P15374 230 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 SAT1P21673 171 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 GNGT1P63211 74 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 DUOXA2Q1HG44 320 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 LGSNQ5TDP6 509 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 MAP1SQ66K74 1059 aaPredicted RBP19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 IDI2Q9BXS1 227 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 ECEL1O95672 775 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 PLS3P13797 630 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 RWDD2BP57060 319 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 SEMA3FQ13275 785 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 SMC6Q96SB8 1091 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 TARS2Q9BW92 718 aaKnown RBP19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 PCSK1NQ9UHG2 260 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 NFU1Q9UMS0 254 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 PIK3C2AO00443 1686 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 NFAT5O94916 1531 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 ESYT3A0FGR9 886 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 EIF3CLB5ME19 914 aaKnown RBP19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 PRPSAP2O60256 369 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 PSMA2P25787 234 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 STX2P32856 288 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 FAM83AQ86UY5 434 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 EIF3CQ99613 913 aaKnown RBP19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 GNAT1P11488 350 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 SREBF1P36956 1147 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 BASP1P80723 227 aaKnown RBP19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 SNRNP35Q16560 246 aaKnown RBP19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 RNF25Q96BH1 459 aaPredicted RBP19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 RNF14Q9UBS8 474 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 FHOD1Q9Y613 1164 aa19.28■□□□□ 0.68
PTPDC1-202ENST00000375360 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 GNA15P30679 374 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 IFNAR2P48551 515 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 FMO5P49326 533 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 CROCCP2Q86T23 111 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 SYT2Q8N9I0 419 aaPredicted RBP19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 ZMYND15Q9H091 742 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 ZRANB2O95218 330 aaKnown RBP eCLIP19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 CTSHP09668 335 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 ALDH3A1P30838 453 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 PSMC6P62333 389 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 EMC2Q15006 297 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 GPRC5AQ8NFJ5 357 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 NUDT12Q9BQG2 462 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 PDE4DIPQ5VU43 2346 aa19.27■□□□□ 0.68
PTPDC1-202ENST00000375360 ACTR2P61160 394 aa19.27■□□□□ 0.67
PTPDC1-202ENST00000375360 HSPH1Q92598 858 aa19.27■□□□□ 0.67
PTPDC1-202ENST00000375360 ADARB2Q9NS39 739 aaKnown RBP19.27■□□□□ 0.67
PTPDC1-202ENST00000375360 KBTBD4Q9NVX7 518 aa19.27■□□□□ 0.67
PTPDC1-202ENST00000375360 SEZ6Q53EL9 994 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 SLC30A5Q8TAD4 765 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 KIF12Q96FN5 646 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 SNX24Q9Y343 169 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 ATP1A1P05023 1023 aaKnown RBP19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 SOX5P35711 763 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 SARNPP82979 210 aaKnown RBP19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 GCOM2Q9BZD3 368 aaPredicted RBP19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 PNMA6AP0CW24 399 aaPredicted RBP19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 CCDC13Q8IYE1 715 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 DDX47Q9H0S4 455 aaKnown RBP19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 EPHX2P34913 555 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 COPB2P35606 906 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 EPHB4P54760 987 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 PDZD4Q76G19 769 aaPredicted RBP19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 ARMCX2Q7L311 632 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 GSPT2Q8IYD1 628 aaKnown RBP19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 SMARCAD1Q9H4L7 1026 aa19.26■□□□□ 0.67
PTPDC1-202ENST00000375360 TNFAIP2Q03169 654 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 SCFD2Q8WU76 684 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 PLCB1Q9NQ66 1216 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 HUS1O60921 280 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 EDRF1Q3B7T1 1238 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 GJB7Q6PEY0 223 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 DARS2Q6PI48 645 aaKnown RBP19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 ERO1BQ86YB8 467 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 CHST13Q8NET6 341 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 NUP85Q9BW27 656 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 AP5Z1O43299 807 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 LPXNO60711 386 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 ARL4AP40617 200 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 EFNA5P52803 228 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 DR1Q01658 176 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 KCNV1Q6PIU1 500 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 GMCL1P1Q8NEA9 526 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 SYTL5Q8TDW5 730 aaPredicted RBP19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 PI4K2AQ9BTU6 479 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 TBK1Q9UHD2 729 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 ANAPC5Q9UJX4 755 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 GAKO14976 1311 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 PITPNM2Q9BZ72 1349 aa19.25■□□□□ 0.67
PTPDC1-202ENST00000375360 VSIG1Q86XK7 387 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 ZNF564Q8TBZ8 553 aaPredicted RBP19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 TBC1D31Q96DN5 1066 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 OSBPL9Q96SU4 736 aa19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 GLIS2Q9BZE0 524 aaPredicted RBP19.24■□□□□ 0.67
PTPDC1-202ENST00000375360 FAM114A2Q9NRY5 505 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms