RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 KIAA1217Q5T5P2 1943 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 ADSSP30520 456 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 NPTX2P47972 431 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 PPP2R5AQ15172 486 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 RPS6KA1Q15418 735 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 KLHL7Q8IXQ5 586 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 XXYLT1Q8NBI6 393 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 LMO3Q8TAP4 145 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 MOV10L1Q9BXT6 1211 aaKnown RBP17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 TOPORSQ9NS56 1045 aaPredicted RBP17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 EIF3JO75822 258 aaKnown RBP17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 TUBBP07437 444 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 JAK3P52333 1124 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 KRT76Q01546 638 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 MAP2K1Q02750 393 aaPredicted RBP17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 TRADDQ15628 312 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 ZNF746Q6NUN9 644 aaPredicted RBP17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 SND1Q7KZF4 910 aaKnown RBP eCLIP17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 SLC9A9Q8IVB4 645 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 TPCN2Q8NHX9 752 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 KLRG1Q96E93 195 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 PCDHA10Q9Y5I2 948 aa17.36■□□□□ 0.37
CNKSR1-202ENST00000374253 DOCK1Q14185 1865 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 DENND3A2RUS2 1198 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 GLI1P08151 1106 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 GTF2BQ00403 316 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 ZNF572Q7Z3I7 529 aaPredicted RBP17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 DAAM2Q86T65 1068 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 CCDC60Q8IWA6 550 aaPredicted RBP17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 LRRC57Q8N9N7 239 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 TSKSQ9UJT2 592 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 ZNF112Q9UJU3 913 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 HPCAL4Q9UM19 191 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 POLR2AP24928 1970 aaKnown RBP17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 CEP104O60308 925 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 LYPLA2O95372 231 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 KCNA2P16389 499 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 MAP9Q49MG5 647 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 INTS8Q75QN2 995 aaKnown RBP17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 TAF4BQ92750 862 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 ARHGEF26Q96DR7 871 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 INPP4AQ96PE3 977 aaPredicted RBP17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 AP1M1Q9BXS5 423 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 CYP39A1Q9NYL5 469 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 STIM2Q9P246 746 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 SEPT9Q9UHD8 586 aaPredicted RBP17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 ADAM21Q9UKJ8 722 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 NENFQ9UMX5 172 aa17.35■□□□□ 0.37
CNKSR1-202ENST00000374253 ADGRA3Q8IWK6 1321 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 KIF4AO95239 1232 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 MCM3P25205 808 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 CNTN2Q02246 1040 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 GPS2Q13227 327 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 TAF3Q5VWG9 929 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 TMEM161BQ8NDZ6 487 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 NSUN6Q8TEA1 469 aaKnown RBP17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 IFT81Q8WYA0 676 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 MAP3K20Q9NYL2 800 aaKnown RBP17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 TBX20Q9UMR3 447 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 PFASO15067 1338 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 PARP14Q460N5 1801 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 SFNP31947 248 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 SP2Q02086 613 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 C10orf76Q5T2E6 689 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 PEX26Q7Z412 305 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 SLC30A5Q8TAD4 765 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 TMEM117Q9H0C3 514 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 KMT5AQ9NQR1 393 aa17.34■□□□□ 0.37
CNKSR1-202ENST00000374253 RLFQ13129 1914 aa17.33■□□□□ 0.37
CNKSR1-202ENST00000374253 LOXHD1Q8IVV2 1947 aa17.33■□□□□ 0.37
CNKSR1-202ENST00000374253 SPDYE16A6NNV3 312 aaPredicted RBP17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 TNFAIP3P21580 790 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 CNGA1P29973 690 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 NCKAP1LP55160 1127 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 GUCY2DQ02846 1103 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 DMP1Q13316 513 aaPredicted RBP17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 SNRNP35Q16560 246 aaKnown RBP17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 HSP90B2PQ58FF3 399 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 CATSPERGQ6ZRH7 1159 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 CYFIP1Q7L576 1253 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 SLC35G2Q8TBE7 412 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 TEX13BQ9BXU2 312 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 THAP2Q9H0W7 228 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 JPH1Q9HDC5 661 aaPredicted RBP17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 GINM1Q9NU53 330 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 GPRC5DQ9NZD1 345 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 TMOD4Q9NZQ9 345 aa17.33■□□□□ 0.36
CNKSR1-202ENST00000374253 HEXIM1O94992 359 aaKnown RBP17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 CALCAP01258 141 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 GGCXP38435 758 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 MXI1P50539 228 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 MTERF2Q49AM1 385 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 TREML2Q5T2D2 321 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 APOBEC3FQ8IUX4 373 aaKnown RBP17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 PPM1KQ8N3J5 372 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 AENQ8WTP8 325 aaKnown RBP17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 SEMA4DQ92854 862 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 EPB41L5Q9HCM4 733 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms