RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 SETDB2Q96T68 719 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 ERP44Q9BS26 406 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 CCDC28BQ9BUN5 200 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 MIS12Q9H081 205 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 DAAM1Q9Y4D1 1078 aa10.27□□□□□ -0.76
SF3A3-201ENST00000373019 BTNL10A8MVZ5 291 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 PHKG2P15735 406 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 ADORA1P30542 326 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 CD97P48960 835 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 GPSM2P81274 684 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 GSTM4Q03013 218 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 MARK2Q7KZI7 788 aaKnown RBP10.27□□□□□ -0.77
SF3A3-201ENST00000373019 PALB2Q86YC2 1186 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 FANCBQ8NB91 859 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 NAP1L3Q99457 506 aaPredicted RBP10.27□□□□□ -0.77
SF3A3-201ENST00000373019 UNC45AQ9H3U1 944 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 STXBP5LQ9Y2K9 1186 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 NUMBLQ9Y6R0 609 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 BICDL2A1A5D9 508 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 PP2D1A8MPX8 630 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 RIPK2O43353 540 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 MARK3P27448 753 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 COPB2P35606 906 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 CCDC6Q16204 474 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 SH2D4BQ5SQS7 431 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF449Q6P9G9 518 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 LRRC43Q8N309 656 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 SNRNP27Q8WVK2 155 aaKnown RBP10.27□□□□□ -0.77
SF3A3-201ENST00000373019 IRGQQ8WZA9 623 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 ESR2Q92731 530 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 GLG1Q92896 1179 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF653Q96CK0 615 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 MPP4Q96JB8 637 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF594Q96JF6 807 aaPredicted RBP10.27□□□□□ -0.77
SF3A3-201ENST00000373019 GRHL1Q9NZI5 618 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.77
SF3A3-201ENST00000373019 TAC1P20366 129 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 FGFR4P22455 802 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 POLD1P28340 1107 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 FOXN2P32314 431 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 HOXD12P35452 270 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 TXKP42681 527 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 R3HDM1Q15032 1099 aaKnown RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 LRP10Q7Z4F1 713 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 LRRC37BQ96QE4 947 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 CENPKQ9BS16 269 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 CADM1Q9BY67 442 aaKnown RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 TNS2Q63HR2 1409 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 PASKQ96RG2 1323 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 A0A087WZG4 1122 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 FAM196BA6NMK8 535 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 KIAA0391O15091 583 aaKnown RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 OR6B1O95007 311 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 IDO1P14902 403 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 MCM7P33993 719 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 IL15P40933 162 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 FUT2Q10981 343 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 MKRN3Q13064 507 aaKnown RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 MOGSQ13724 837 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 ZNF568Q3ZCX4 644 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 DAAM2Q86T65 1068 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 ANKRD42Q8N9B4 389 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 ARHGEF2Q92974 986 aaKnown RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 HPS3Q969F9 1004 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 ABTB1Q969K4 478 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 ERVK-5Q9HDB9 667 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 EFR3BQ9Y2G0 817 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 RNASEH1O60930 286 aaKnown RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 PTENP60484 403 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 LONRF1Q17RB8 773 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 INTS8Q75QN2 995 aaKnown RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 DTX3LQ8TDB6 740 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 SYN2Q92777 582 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 PLIN2Q99541 437 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 RNF26Q9BY78 433 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 ARHGEF38Q9NXL2 777 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 STX18Q9P2W9 335 aaKnown RBP10.26□□□□□ -0.77
SF3A3-201ENST00000373019 SNX24Q9Y343 169 aa10.26□□□□□ -0.77
SF3A3-201ENST00000373019 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 DDX3XO00571 662 aaKnown RBP eCLIP10.25□□□□□ -0.775e-24■■■□□ 15.2
SF3A3-201ENST00000373019 PSMG1O95456 288 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 PTPN4P29074 926 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 MAN2A1Q16706 1144 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 FAM83BQ5T0W9 1011 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 SYDE2Q5VT97 1194 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 SLFN11Q7Z7L1 901 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 NELFCDQ8IXH7 590 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 KIAA0895Q8NCT3 520 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 NMD3Q96D46 503 aaKnown RBP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 MAGEB18Q96M61 343 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 EDEM3Q9BZQ6 932 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 TMOD4Q9NZQ9 345 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 LARSQ9P2J5 1176 aaKnown RBP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 TRIM43BA6NCK2 446 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 TMEM247A6NEH6 219 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 RNMTO43148 476 aaKnown RBP10.25□□□□□ -0.77
SF3A3-201ENST00000373019 ATP9BO43861 1147 aa10.25□□□□□ -0.77
SF3A3-201ENST00000373019 POLR2FP61218 127 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms