RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 SETDB1Q15047 1291 aa20.16■□□□□ 0.82
PRDM1-202ENST00000369091 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
PRDM1-202ENST00000369091 MARCH10Q8NA82 808 aaPredicted RBP20.16■□□□□ 0.82
PRDM1-202ENST00000369091 SNX29Q8TEQ0 813 aa20.16■□□□□ 0.82
PRDM1-202ENST00000369091 ARHGEF26Q96DR7 871 aa20.16■□□□□ 0.82
PRDM1-202ENST00000369091 CEP63Q96MT8 703 aa20.16■□□□□ 0.82
PRDM1-202ENST00000369091 DDX50Q9BQ39 737 aaKnown RBP20.16■□□□□ 0.82
PRDM1-202ENST00000369091 NT5C3AQ9H0P0 336 aa20.16■□□□□ 0.82
PRDM1-202ENST00000369091 SEC63Q9UGP8 760 aaKnown RBP20.16■□□□□ 0.82
PRDM1-202ENST00000369091 LRCH1Q9Y2L9 728 aa20.16■□□□□ 0.82
PRDM1-202ENST00000369091 PCDHA3Q9Y5H8 950 aa20.16■□□□□ 0.82
PRDM1-202ENST00000369091 NPHP3-ACAD11A0A0J9YXS1 232 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 PHF2O75151 1096 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 GFPT2O94808 682 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 FAM163BP0C2L3 166 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 MARCKSL1P49006 195 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 DRG2P55039 364 aaKnown RBP20.15■□□□□ 0.82
PRDM1-202ENST00000369091 ACVR2BQ13705 512 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 RRP1BQ14684 758 aaKnown RBP20.15■□□□□ 0.82
PRDM1-202ENST00000369091 CCDC6Q16204 474 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 NEK8Q86SG6 692 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 PNMA1Q8ND90 353 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 TBCKQ8TEA7 893 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 POP1Q99575 1024 aaKnown RBP20.15■□□□□ 0.82
PRDM1-202ENST00000369091 NDNQ99608 321 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 MAD2L2Q9UI95 211 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 USP20Q9Y2K6 914 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 BZW2Q9Y6E2 419 aaKnown RBP20.15■□□□□ 0.82
PRDM1-202ENST00000369091 PITPNM2Q9BZ72 1349 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 VCAM1P19320 739 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 PON1P27169 355 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 NAPAP54920 295 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 SNX30Q5VWJ9 437 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 SCG3Q8WXD2 468 aaKnown RBP20.15■□□□□ 0.82
PRDM1-202ENST00000369091 CNKSR2Q8WXI2 1034 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 MAGEB18Q96M61 343 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 BRIP1Q9BX63 1249 aa20.15■□□□□ 0.82
PRDM1-202ENST00000369091 CREB3O43889 395 aa20.14■□□□□ 0.82
PRDM1-202ENST00000369091 COQ9O75208 318 aa20.14■□□□□ 0.82
PRDM1-202ENST00000369091 VHLP40337 213 aa20.14■□□□□ 0.82
PRDM1-202ENST00000369091 WASHC2DQ5SRD0 308 aa20.14■□□□□ 0.82
PRDM1-202ENST00000369091 ZNF513Q8N8E2 541 aaPredicted RBP20.14■□□□□ 0.82
PRDM1-202ENST00000369091 GJA10Q969M2 543 aa20.14■□□□□ 0.82
PRDM1-202ENST00000369091 DNAJC19Q96DA6 116 aa20.14■□□□□ 0.82
PRDM1-202ENST00000369091 CARD9Q9H257 536 aa20.14■□□□□ 0.82
PRDM1-202ENST00000369091 TMEM260Q9NX78 707 aa20.14■□□□□ 0.82
PRDM1-202ENST00000369091 COL22A1Q8NFW1 1626 aaPredicted RBP20.14■□□□□ 0.81
PRDM1-202ENST00000369091 ARAP2Q8WZ64 1704 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 PDE8AO60658 829 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 UBTFL6P0CB48 400 aaPredicted RBP20.14■□□□□ 0.81
PRDM1-202ENST00000369091 KCNJ1P48048 391 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 RCN1Q15293 331 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 CERKLQ49MI3 558 aaPredicted RBP20.14■□□□□ 0.81
PRDM1-202ENST00000369091 KRT28Q7Z3Y7 464 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 NCAPG2Q86XI2 1143 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 GLYCTKQ8IVS8 523 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 GBP5Q96PP8 586 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 LRRC37BQ96QE4 947 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 ATP8A2Q9NTI2 1148 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 CTTNBP2NLQ9P2B4 639 aa20.14■□□□□ 0.81
PRDM1-202ENST00000369091 TCRBV7S2A1N4TA0A589 114 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 WTIPA6NIX2 430 aaPredicted RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 SLC37A4O43826 429 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 KRT36O76013 467 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 CYP1A1P04798 512 aaPredicted RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 CETPP11597 493 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 PPATQ06203 517 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 CTTNQ14247 550 aaKnown RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 SRRM1Q8IYB3 904 aaKnown RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 ZNF384Q8TF68 577 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 KRT35Q92764 455 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 BIN2Q9UBW5 565 aaPredicted RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 SPATA31D3P0C874 917 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 PRKCIP41743 596 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 NPEPPSP55786 919 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 DNAJC3Q13217 504 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 DCAF17Q5H9S7 520 aaPredicted RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 CCDC137Q6PK04 289 aaKnown RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 SPATA31D4Q6ZUB0 917 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 DNAJC10Q8IXB1 793 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 OLIG1Q8TAK6 271 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 UIMC1Q96RL1 719 aa20.13■□□□□ 0.81
PRDM1-202ENST00000369091 ROPN1BQ9BZX4 212 aaPredicted RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 ROPN1Q9HAT0 212 aaPredicted RBP20.13■□□□□ 0.81
PRDM1-202ENST00000369091 ZSCAN9O15535 394 aaPredicted RBP20.12■□□□□ 0.81
PRDM1-202ENST00000369091 TJP3O95049 919 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 CHKAP35790 457 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 MKRN3Q13064 507 aaKnown RBP20.12■□□□□ 0.81
PRDM1-202ENST00000369091 MYBPC3Q14896 1274 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 CALCRLQ16602 461 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 KRT25Q7Z3Z0 450 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 INPP5DQ92835 1189 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 ART4Q93070 314 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 DCLRE1BQ9H816 532 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 ZWILCHQ9H900 591 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 SLCO1B3Q9NPD5 702 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 AAASQ9NRG9 546 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 USP40Q9NVE5 1235 aa20.12■□□□□ 0.81
PRDM1-202ENST00000369091 DNAAF2Q9NVR5 837 aaKnown RBP20.12■□□□□ 0.81
PRDM1-202ENST00000369091 RREB1Q92766 1687 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms