RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 TRIM51Q9BSJ1 452 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 POLR3CQ9BUI4 534 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 ATP6V0A4Q9HBG4 840 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 AGPAT3Q9NRZ7 376 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 INTS9Q9NV88 658 aaKnown RBP9.11□□□□□ -0.95
PTPRK-206ENST00000368215 FAM198AQ9UFP1 575 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 NAGPAQ9UK23 515 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 ODF2LQ9ULJ1 636 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 PCDHA10Q9Y5I2 948 aa9.11□□□□□ -0.95
PTPRK-206ENST00000368215 VGLL3A8MV65 326 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 POC1B-GALNT4F8VUJ3 575 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 CASP5P51878 434 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 RPS6P62753 249 aaKnown RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 KCTD2Q14681 263 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 ECM1Q16610 540 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 DACT2Q5SW24 774 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 MICALL2Q8IY33 904 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 OR2W6PQ8NHA6 318 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 FBXL5Q9UKA1 691 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 GRID2IPA4D2P6 1211 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 SPDYE2BA6NHP3 402 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 STAM2O75886 525 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 SPDYE6P0CI01 402 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 PBX1P40424 430 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 ZKSCAN8Q15776 578 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 NBPF9Q3BBW0 867 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 SUPT20HL1Q3ZLR7 823 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 EPC2Q52LR7 807 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 MIIPQ5JXC2 388 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 GKAP1Q5VSY0 366 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 C15orf52Q6ZUT6 534 aaKnown RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 CCDC13Q8IYE1 715 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 MCPH1Q8NEM0 835 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 GRK7Q8WTQ7 553 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 CELF4Q9BZC1 486 aaKnown RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 POLR3FQ9H1D9 316 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 MYO1CO00159 1063 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 NFIBO00712 420 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 ZRSR2Q15696 482 aaKnown RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 ZNF571Q7Z3V5 609 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 CROCCP2Q86T23 111 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 HDAC7Q8WUI4 952 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 HNRNPLLQ8WVV9 542 aaKnown RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 RSAD2Q8WXG1 361 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 ATG4CQ96DT6 458 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 GMCL1Q96IK5 515 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 HOMER3Q9NSC5 361 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 ADAM22Q9P0K1 906 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 ACOT2P49753 483 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 TMEM143Q96AN5 459 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 FERMT1Q9BQL6 677 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 CD2APQ9Y5K6 639 aa9.1□□□□□ -0.95
PTPRK-206ENST00000368215 COL1A1P02452 1464 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-206ENST00000368215 LRRD1A4D1F6 860 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 PPP1R11O60927 126 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 NR3C2P08235 984 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 SFNP31947 248 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 YARSP54577 528 aaKnown RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 GUCY1A3Q02108 690 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 MKRN3Q13064 507 aaKnown RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 STXBP2Q15833 593 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 CRY2Q49AN0 593 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 HHATQ5VTY9 493 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 FBXL13Q8NEE6 735 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 ZSCAN5CA6NGD5 496 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 WDR46O15213 610 aaKnown RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 KRT1P04264 644 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 CAP2P40123 477 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 MAGOHP61326 146 aaKnown RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 SETDB1Q15047 1291 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 SLC15A2Q16348 729 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 DNAJC24Q6P3W2 148 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 CTAGE3PQ8IX95 158 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 MMGT1Q8N4V1 131 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 C1orf54Q8WWF1 131 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 ELMO3Q96BJ8 720 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 CBWD1Q9BRT8 395 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 PI4K2AQ9BTU6 479 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 APOL6Q9BWW8 343 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 CNOT7Q9UIV1 285 aaKnown RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 ANAPC5Q9UJX4 755 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 AKT3Q9Y243 479 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 SIK3Q9Y2K2 1263 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 REXO2Q9Y3B8 237 aaKnown RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 TMEM150BA6NC51 233 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 MIF4GDA9UHW6 222 aaKnown RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 SGK1O00141 431 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 FOXN3O00409 490 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 CLDN3O15551 220 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 PLS3P13797 630 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 HSPA6P17066 643 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 SNRNP35Q16560 246 aaKnown RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 MEA1Q16626 185 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 KCTD19Q17RG1 926 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 BSPRYQ5W0U4 402 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 FBF1Q8TES7 1133 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 RNF25Q96BH1 459 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-206ENST00000368215 DNAJC19Q96DA6 116 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 TMX2Q9Y320 296 aa9.09□□□□□ -0.95
PTPRK-206ENST00000368215 SYNGAP1Q96PV0 1343 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms