RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SPATA21Q7Z572 469 aa19.19■□□□□ 0.66
APP-202ENST00000348990 ARMC2Q8NEN0 867 aa19.19■□□□□ 0.66
APP-202ENST00000348990 RPTORQ8N122 1335 aa19.19■□□□□ 0.66
APP-202ENST00000348990 RIPK2O43353 540 aa19.19■□□□□ 0.66
APP-202ENST00000348990 KCNQ2O43526 872 aa19.19■□□□□ 0.66
APP-202ENST00000348990 RARAP10276 462 aa19.19■□□□□ 0.66
APP-202ENST00000348990 CHRNA3P32297 505 aa19.19■□□□□ 0.66
APP-202ENST00000348990 SLMAPQ14BN4 828 aa19.19■□□□□ 0.66
APP-202ENST00000348990 MFSD14BQ5SR56 506 aa19.19■□□□□ 0.66
APP-202ENST00000348990 HS2ST1Q7LGA3 356 aa19.19■□□□□ 0.66
APP-202ENST00000348990 MRRFQ96E11 262 aaKnown RBP19.19■□□□□ 0.66
APP-202ENST00000348990 TRIM7Q9C029 511 aa19.19■□□□□ 0.66
APP-202ENST00000348990 RGL1Q9NZL6 768 aa19.19■□□□□ 0.66
APP-202ENST00000348990 FRMD4BQ9Y2L6 1034 aa19.19■□□□□ 0.66
APP-202ENST00000348990 hCG_1984214I3L0E3 225 aa19.18■□□□□ 0.66
APP-202ENST00000348990 PPP1R11O60927 126 aaPredicted RBP19.18■□□□□ 0.66
APP-202ENST00000348990 MYBL1P10243 752 aa19.18■□□□□ 0.66
APP-202ENST00000348990 BRAFP15056 766 aa19.18■□□□□ 0.66
APP-202ENST00000348990 PCK1P35558 622 aa19.18■□□□□ 0.66
APP-202ENST00000348990 PSMC2P35998 433 aaKnown RBP19.18■□□□□ 0.66
APP-202ENST00000348990 MSH2P43246 934 aa19.18■□□□□ 0.66
APP-202ENST00000348990 CRELD2Q6UXH1 353 aaPredicted RBP19.18■□□□□ 0.66
APP-202ENST00000348990 INTS8Q75QN2 995 aaKnown RBP19.18■□□□□ 0.66
APP-202ENST00000348990 CROCCP2Q86T23 111 aa19.18■□□□□ 0.66
APP-202ENST00000348990 EXOC3L1Q86VI1 746 aa19.18■□□□□ 0.66
APP-202ENST00000348990 ZNF713Q8N859 430 aaPredicted RBP19.18■□□□□ 0.66
APP-202ENST00000348990 SIX2Q9NPC8 291 aa19.18■□□□□ 0.66
APP-202ENST00000348990 NKIRAS1Q9NYS0 192 aa19.18■□□□□ 0.66
APP-202ENST00000348990 INTUQ9ULD6 942 aa19.18■□□□□ 0.66
APP-202ENST00000348990 HIP1RO75146 1068 aa19.18■□□□□ 0.66
APP-202ENST00000348990 SLC12A3P55017 1021 aa19.18■□□□□ 0.66
APP-202ENST00000348990 NPEPPSP55786 919 aa19.18■□□□□ 0.66
APP-202ENST00000348990 NFIXQ14938 502 aa19.18■□□□□ 0.66
APP-202ENST00000348990 TPH2Q8IWU9 490 aa19.18■□□□□ 0.66
APP-202ENST00000348990 PRELID2Q8N945 189 aa19.18■□□□□ 0.66
APP-202ENST00000348990 C1orf54Q8WWF1 131 aa19.18■□□□□ 0.66
APP-202ENST00000348990 BTBD6Q96KE9 485 aa19.18■□□□□ 0.66
APP-202ENST00000348990 RUSC1Q9BVN2 902 aa19.18■□□□□ 0.66
APP-202ENST00000348990 ANO3Q9BYT9 981 aa19.18■□□□□ 0.66
APP-202ENST00000348990 TRAF3IP3Q9Y228 551 aa19.18■□□□□ 0.66
APP-202ENST00000348990 AFF2P51816 1311 aa19.18■□□□□ 0.66
APP-202ENST00000348990 A0A1W2PRG0 241 aa19.18■□□□□ 0.66
APP-202ENST00000348990 PODXLO00592 558 aa19.18■□□□□ 0.66
APP-202ENST00000348990 COG2Q14746 738 aa19.18■□□□□ 0.66
APP-202ENST00000348990 SRRM1Q8IYB3 904 aaKnown RBP19.18■□□□□ 0.66
APP-202ENST00000348990 SLC20A1Q8WUM9 679 aa19.18■□□□□ 0.66
APP-202ENST00000348990 SEC14L1Q92503 715 aa19.18■□□□□ 0.66
APP-202ENST00000348990 SAAL1Q96ER3 474 aa19.18■□□□□ 0.66
APP-202ENST00000348990 TGS1Q96RS0 853 aaKnown RBP19.18■□□□□ 0.66
APP-202ENST00000348990 STK33Q9BYT3 514 aa19.18■□□□□ 0.66
APP-202ENST00000348990 COG5Q9UP83 839 aa19.18■□□□□ 0.66
APP-202ENST00000348990 COL4A1P02462 1669 aa19.17■□□□□ 0.66
APP-202ENST00000348990 H0Y3Z8 333 aa19.17■□□□□ 0.66
APP-202ENST00000348990 EXOC3O60645 756 aa19.17■□□□□ 0.66
APP-202ENST00000348990 ATP2A2P16615 1042 aaKnown RBP19.17■□□□□ 0.66
APP-202ENST00000348990 CCND1P24385 295 aa19.17■□□□□ 0.66
APP-202ENST00000348990 FOXR2Q6PJQ5 311 aa19.17■□□□□ 0.66
APP-202ENST00000348990 CLEC4GQ6UXB4 293 aa19.17■□□□□ 0.66
APP-202ENST00000348990 NSMFQ6X4W1 530 aa19.17■□□□□ 0.66
APP-202ENST00000348990 EBF2Q9HAK2 575 aa19.17■□□□□ 0.66
APP-202ENST00000348990 UBE2TQ9NPD8 197 aaPredicted RBP19.17■□□□□ 0.66
APP-202ENST00000348990 BATF3Q9NR55 127 aa19.17■□□□□ 0.66
APP-202ENST00000348990 DIS3Q9Y2L1 958 aaKnown RBP19.17■□□□□ 0.66
APP-202ENST00000348990 PASKQ96RG2 1323 aa19.17■□□□□ 0.66
APP-202ENST00000348990 SYNGAP1Q96PV0 1343 aa19.17■□□□□ 0.66
APP-202ENST00000348990 TCRBV7S2A1N4TA0A589 114 aa19.17■□□□□ 0.66
APP-202ENST00000348990 ANKRD63C9JTQ0 380 aa19.17■□□□□ 0.66
APP-202ENST00000348990 GH1P01241 217 aa19.17■□□□□ 0.66
APP-202ENST00000348990 COMTP21964 271 aa19.17■□□□□ 0.66
APP-202ENST00000348990 CTTNQ14247 550 aaKnown RBP19.17■□□□□ 0.66
APP-202ENST00000348990 GRHL1Q9NZI5 618 aa19.17■□□□□ 0.66
APP-202ENST00000348990 LRP5O75197 1615 aa19.17■□□□□ 0.66
APP-202ENST00000348990 FOXN3O00409 490 aaPredicted RBP19.16■□□□□ 0.66
APP-202ENST00000348990 SLURP2P0DP57 97 aa19.16■□□□□ 0.66
APP-202ENST00000348990 HOXD13P35453 343 aa19.16■□□□□ 0.66
APP-202ENST00000348990 FMO5P49326 533 aa19.16■□□□□ 0.66
APP-202ENST00000348990 KYNUQ16719 465 aa19.16■□□□□ 0.66
APP-202ENST00000348990 TTC27Q6P3X3 843 aa19.16■□□□□ 0.66
APP-202ENST00000348990 RUNDC3BQ96NL0 473 aa19.16■□□□□ 0.66
APP-202ENST00000348990 RTFDC1Q9BY42 306 aaPredicted RBP19.16■□□□□ 0.66
APP-202ENST00000348990 ARL2BPQ9Y2Y0 163 aa19.16■□□□□ 0.66
APP-202ENST00000348990 RABGAP1Q9Y3P9 1069 aa19.16■□□□□ 0.66
APP-202ENST00000348990 ANKRD62A6NC57 917 aa19.16■□□□□ 0.66
APP-202ENST00000348990 ZBTB5O15062 677 aa19.16■□□□□ 0.66
APP-202ENST00000348990 THAP12O43422 761 aa19.16■□□□□ 0.66
APP-202ENST00000348990 DLATP10515 647 aaKnown RBP19.16■□□□□ 0.66
APP-202ENST00000348990 PPP4CP60510 307 aa19.16■□□□□ 0.66
APP-202ENST00000348990 ZNF268Q14587 947 aaPredicted RBP19.16■□□□□ 0.66
APP-202ENST00000348990 FBF1Q8TES7 1133 aa19.16■□□□□ 0.66
APP-202ENST00000348990 ZNF570Q96NI8 536 aa19.16■□□□□ 0.66
APP-202ENST00000348990 NYXQ9GZU5 481 aa19.16■□□□□ 0.66
APP-202ENST00000348990 SPATS2LQ9NUQ6 558 aaKnown RBP19.16■□□□□ 0.66
APP-202ENST00000348990 UFL1O94874 794 aa19.16■□□□□ 0.66
APP-202ENST00000348990 ZBTB48P10074 688 aaPredicted RBP19.16■□□□□ 0.66
APP-202ENST00000348990 SMARCA1P28370 1054 aa19.16■□□□□ 0.66
APP-202ENST00000348990 ZNF543Q08ER8 600 aa19.16■□□□□ 0.66
APP-202ENST00000348990 GRIPAP1Q4V328 841 aa19.16■□□□□ 0.66
APP-202ENST00000348990 SLFN12Q8IYM2 578 aa19.16■□□□□ 0.66
APP-202ENST00000348990 LBHD1Q9BQE6 289 aaPredicted RBP19.16■□□□□ 0.66
APP-202ENST00000348990 TXLNGYQ9BZA5 131 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms