RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 GCNT3O95395 438 aa15.47■□□□□ 0.07
VRK3-201ENST00000316763 MYBP10242 640 aa15.47■□□□□ 0.07
VRK3-201ENST00000316763 LACTBP83111 547 aaPredicted RBP15.47■□□□□ 0.07
VRK3-201ENST00000316763 CTTNQ14247 550 aaKnown RBP15.47■□□□□ 0.07
VRK3-201ENST00000316763 SLC18A3Q16572 532 aa15.47■□□□□ 0.07
VRK3-201ENST00000316763 C10orf76Q5T2E6 689 aa15.47■□□□□ 0.07
VRK3-201ENST00000316763 PLEKHH3Q7Z736 793 aa15.47■□□□□ 0.07
VRK3-201ENST00000316763 SENP7Q9BQF6 1050 aa15.47■□□□□ 0.07
VRK3-201ENST00000316763 OLFML3Q9NRN5 406 aa15.47■□□□□ 0.07
VRK3-201ENST00000316763 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
VRK3-201ENST00000316763 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.47■□□□□ 0.07
VRK3-201ENST00000316763 RNF14Q9UBS8 474 aa15.47■□□□□ 0.07
VRK3-201ENST00000316763 NFASCO94856 1347 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 LOC102724159A0A0B4J2E5 919 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 H3BQF6 201 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 DDX39AO00148 427 aaKnown RBP15.46■□□□□ 0.07
VRK3-201ENST00000316763 EIF3DO15371 548 aaKnown RBP eCLIP15.46■□□□□ 0.07
VRK3-201ENST00000316763 STRNO43815 780 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 CCNE2O96020 404 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 NR3C1P04150 777 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 PGK2P07205 417 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 KRT76Q01546 638 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 PWP2Q15269 919 aaKnown RBP15.46■□□□□ 0.07
VRK3-201ENST00000316763 EXOC3L4Q17RC7 722 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 RINT1Q6NUQ1 792 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 MIER3Q7Z3K6 550 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 TPH2Q8IWU9 490 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 SPAG5Q96R06 1193 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.46■□□□□ 0.07
VRK3-201ENST00000316763 RUSC1Q9BVN2 902 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 ARHGAP39Q9C0H5 1083 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 SUGCTQ9HAC7 445 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 MED4Q9NPJ6 270 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 WRAP73Q9P2S5 460 aaPredicted RBP15.46■□□□□ 0.07
VRK3-201ENST00000316763 IVNS1ABPQ9Y6Y0 642 aa15.46■□□□□ 0.07
VRK3-201ENST00000316763 P4HBP07237 508 aaKnown RBP15.45■□□□□ 0.06
VRK3-201ENST00000316763 SFNP31947 248 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 PSMC4P43686 418 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 TNNT3P45378 269 aaPredicted RBP15.45■□□□□ 0.06
VRK3-201ENST00000316763 CAP1Q01518 475 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 C2orf54Q08AI8 447 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 NAB2Q15742 525 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 TAF3Q5VWG9 929 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 ZNF746Q6NUN9 644 aaPredicted RBP15.45■□□□□ 0.06
VRK3-201ENST00000316763 STXBP4Q6ZWJ1 553 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 GPIHBP1Q8IV16 184 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 ABRAQ8N0Z2 381 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 RDM1Q8NG50 284 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 FAM71BQ8TC56 605 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 MORC4Q8TE76 937 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 EXOC4Q96A65 974 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 PLXNA1Q9UIW2 1896 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 A0A0U1RQG5 324 aaPredicted RBP15.45■□□□□ 0.06
VRK3-201ENST00000316763 HOXD13P35453 343 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 JAK3P52333 1124 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 ARID5AQ03989 594 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 NFRKBQ6P4R8 1299 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 GBP6Q6ZN66 633 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 NACC1Q96RE7 527 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 LXNQ9BS40 222 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 PSD3Q9NYI0 1048 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 SEL1LQ9UBV2 794 aa15.45■□□□□ 0.06
VRK3-201ENST00000316763 LOXHD1Q8IVV2 1947 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 SLC15A5A6NIM6 579 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 WDR64B1ANS9 1081 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 RSPH10B2B2RC85 870 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 TNPO2O14787 897 aaKnown RBP15.44■□□□□ 0.06
VRK3-201ENST00000316763 BUB1O43683 1085 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 LYPLA2O95372 231 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 RSPH10BP0C881 870 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 ANXA13P27216 316 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 ADORA2AP29274 412 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 GRB14Q14449 540 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 NFIL3Q16649 462 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 DCAF17Q5H9S7 520 aaPredicted RBP15.44■□□□□ 0.06
VRK3-201ENST00000316763 KLHDC7AQ5VTJ3 777 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 CCNI2Q6ZMN8 369 aaPredicted RBP15.44■□□□□ 0.06
VRK3-201ENST00000316763 MYCT1Q8N699 235 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 BANK1Q8NDB2 785 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 SPATA4Q8NEY3 305 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 COG1Q8WTW3 980 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 ZNF296Q8WUU4 475 aaPredicted RBP15.44■□□□□ 0.06
VRK3-201ENST00000316763 MPHOSPH6Q99547 160 aaKnown RBP15.44■□□□□ 0.06
VRK3-201ENST00000316763 KCND2Q9NZV8 630 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 FBXL5Q9UKA1 691 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 ADAM21Q9UKJ8 722 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 UBE4BO95155 1302 aa15.44■□□□□ 0.06
VRK3-201ENST00000316763 FKTNO75072 461 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 UCHL3P15374 230 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 FCGRTP55899 365 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 SP2Q02086 613 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 KIF22Q14807 665 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 IFI16Q16666 785 aaKnown RBP15.43■□□□□ 0.06
VRK3-201ENST00000316763 CFAP221Q4G0U5 840 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 MORN1Q5T089 497 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 TCERG1LQ5VWI1 586 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 C1orf186Q6ZWK4 172 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 CD99L2Q8TCZ2 262 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 PIGOQ8TEQ8 1089 aa15.43■□□□□ 0.06
VRK3-201ENST00000316763 PARVGQ9HBI0 331 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms