RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 OFD1O75665 1012 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 CXCL14O95715 111 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 EARS2Q5JPH6 523 aaKnown RBP19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 IER5LQ5T953 404 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 CATSPER4Q7RTX7 472 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 NEK8Q86SG6 692 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 VPS52Q8N1B4 723 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 BCL7CQ8WUZ0 217 aaPredicted RBP19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 AUTS2Q8WXX7 1259 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 CASP10Q92851 521 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 SLKQ9H2G2 1235 aaPredicted RBP19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 NRDE2Q9H7Z3 1164 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 TBC1D13Q9NVG8 400 aa19.56■□□□□ 0.72
EXOSC4-201ENST00000316052 B4GALT3O60512 393 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 PFKFB2O60825 505 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 CTDNEP1O95476 244 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 P4HBP07237 508 aaKnown RBP19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 GALTP07902 379 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 SP100P23497 879 aaPredicted RBP19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 NOMO2Q5JPE7 1267 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 PIK3AP1Q6ZUJ8 805 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 PRPF31Q8WWY3 499 aaKnown RBP19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 TMEM143Q96AN5 459 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 TMEM169Q96HH4 297 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 JPH2Q9BR39 696 aaPredicted RBP19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 ZBP1Q9H171 429 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 DHX33Q9H6R0 707 aaKnown RBP19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 MINDY3Q9H8M7 445 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 INPP5FQ9Y2H2 1132 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 COL4A3BPQ9Y5P4 624 aa19.55■□□□□ 0.72
EXOSC4-201ENST00000316052 FAM205CA6NFA0 338 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 ZBTB39O15060 712 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 CCNT1O60563 726 aaKnown RBP19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 CDKL5O76039 1030 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 SKIP12755 728 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 MRE11P49959 708 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 AFF1P51825 1210 aaKnown RBP19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 KANK3Q6NY19 840 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 GLB1LQ6UWU2 654 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 DDX53Q86TM3 631 aaKnown RBP19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 ZNF280BQ86YH2 543 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 ASIC4Q96FT7 647 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 IGSF21Q96ID5 467 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 CEP170P1Q96L14 293 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 VN1R3Q9BXE9 311 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 ADAM7Q9H2U9 754 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 AGPAT5Q9NUQ2 364 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 RGL1Q9NZL6 768 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 DNAJB4Q9UDY4 337 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 PCDHB2Q9Y5E7 798 aa19.54■□□□□ 0.72
EXOSC4-201ENST00000316052 STK36Q9NRP7 1315 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 WEE2P0C1S8 567 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 SRGAP2CP0DJJ0 459 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 GCFC2P16383 781 aaKnown RBP19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 HOXA11P31270 313 aaPredicted RBP19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 CA8P35219 290 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 SIGLEC14Q08ET2 396 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 LAMTOR4Q0VGL1 99 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 EPHA7Q15375 998 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 PTPN21Q16825 1174 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 TPRNQ4KMQ1 711 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 AGMOQ6ZNB7 445 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 MRPL10Q7Z7H8 261 aaKnown RBP19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 C4orf19Q8IY42 314 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 C12orf76Q8N812 135 aaPredicted RBP19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 PRSS33Q8NF86 280 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 SLC7A3Q8WY07 619 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 LXNQ9BS40 222 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 GBP3Q9H0R5 595 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 POMKQ9H5K3 350 aa19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 BMP2KQ9NSY1 1161 aaPredicted RBP19.53■□□□□ 0.72
EXOSC4-201ENST00000316052 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 TBX3O15119 743 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 DKC1O60832 514 aaKnown RBP eCLIP19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 CTSAP10619 480 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 SLC11A1P49279 550 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 RAB27AP51159 221 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 POLGP54098 1239 aaPredicted RBP19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 RNASELQ05823 741 aaKnown RBP19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 SPIRE1Q08AE8 756 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 CTTNQ14247 550 aaKnown RBP19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 UBXN11Q5T124 520 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 FBXL6Q8N531 539 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 FEZF2Q8TBJ5 459 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 RSPH1Q8WYR4 309 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 DYDC2Q96IM9 177 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 TSHZ2Q9NRE2 1034 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 ORC3Q9UBD5 711 aaPredicted RBP19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 IRAK3Q9Y616 596 aa19.52■□□□□ 0.72
EXOSC4-201ENST00000316052 DDHD2O94830 711 aa19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 FDPSP14324 419 aaKnown RBP19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 EPCAMP16422 314 aa19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 XBP1P17861 261 aa19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 YWHABP31946 246 aaKnown RBP19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 RFC5P40937 340 aa19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 ITIH3Q06033 890 aa19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 NR5A1Q13285 461 aa19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 RARS2Q5T160 578 aaKnown RBP19.51■□□□□ 0.71
EXOSC4-201ENST00000316052 NCAPH2Q6IBW4 605 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms